BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09211 (UTR included)
(1498 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A2E02 1610 0.0
>BF01059A2E02
Length = 867
Score = 1610 bits (812), Expect = 0.0
Identities = 856/868 (98%), Gaps = 2/868 (0%)
Strand = Plus / Plus
Query: 380 gtcaagcttaatatatttgtggatttactgaatatttaataactgtaaataaatgtaata 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaagcttaatatatttgtggatttactgaatatttaataactgtaaataaatgtaata 60
Query: 440 aaagttaattaaagtgagttgcgaactaaggatttagaataccaactgcatttaagttaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagttaattaaagtgagttgcgaactaaggatttagaataccaactgcatttaagttaa 120
Query: 500 aatggctgacgtgttagatattgaaaattcagaagaatttgaagtggacgaagatggtga 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggctgacgtgttagatattgaaaattcagaagaatttgaagtggacgaagatggtga 180
Query: 560 acagggtattgtccgtctgaaggaaaaggcgcgcaaacgtaaaggtcgtggatttggatc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagggtattgtccgtctgaaggaaaaggcgcgcaaacgtaaaggtcgtggatttggatc 240
Query: 620 ggaggcaggcggaggcggctccgaaagaggcaataggggcagatatgacagccttgcacc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggcaggcggaggcggctccgaaagaggcaataggggcagatatgacagccttgcacc 300
Query: 680 agaaggtaatgggaatactcctgggccacaaagatcggttgaaggatggatcctgtttgt 739
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggtaatgggaatactcccgggccacaaagatcggttgaaggatggatcctgtttgt 360
Query: 740 cagtaatgtgcatgaagaagcacaggaagaagatattcagaaccagttctcagagtttgg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagtaatgtgcatgaagaagcacaggaagaagatattcagaaccagttctcagagtttgg 420
Query: 800 ggagataaagaatattcatttaaatcttgatagacgcacgggattcttgaaaggctatgc 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagataaagaatattcatttaaatcttgatagacgcacgggattcttgaaaggctatgc 480
Query: 860 cctagtcgagtacgagacgtacaaacaggctgctagtgctagggaagctctagacggtac 919
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 481 cctagtcgagtacgagacgtacaaacaggctgctagtgccagggaagctctagacggcac 540
Query: 920 agacatactcggtcaggcaatctctgtggactggtgttttgttaaaggaccaaccaagac 979
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 541 agacatactcggtcaggcaatttccgtggactggtgttttgttaaaggaccaaccaagac 600
Query: 980 tcacaagaaacggcgataataattttttgcaatag-tttatcacatctaaatgtattaag 1038
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 601 tcacaagaaacggcgataataactttttgcaatagttttatcacatctaaatgtattaag 660
Query: 1039 tacatactttttggtaattattgtctatgtaaattctactagatatatttttaatctatc 1098
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacatattttttggtaattattgtctatgtaaattctactagatatatttttaatctatc 720
Query: 1099 tttcatttattatctgtcaaataacaaaaaaatgtctggaataatttattgaaaactggt 1158
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 721 tttcatttattatctgtcaaataac-gaaaaatgtctggaataatttattgaaaactggt 779
Query: 1159 gttataatttataacgctggacattaaatgcttcattcatagttaacatagtctctactg 1218
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 780 gttataatttataacgctggtcattaaaggcttcattcatagttaacatagtctctactg 839
Query: 1219 aacattgtttaagctagctgtatttgta 1246
||||||||||||||||||||||||||||
Sbjct: 840 aacattgtttaagctagctgtatttgta 867
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,264
Number of extensions: 5378
Number of successful extensions: 5378
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5376
Number of HSP's successfully gapped: 1
Length of query: 1498
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1481
Effective length of database: 8,119,229
Effective search space: 12024578149
Effective search space used: 12024578149
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)