BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09220 (UTR included)
(1310 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2E06 101 3e-21
BF14_335_C2 90 1e-17
BF01043B1E03 76 2e-13
BF01047B2H03 76 2e-13
BF14_335_C5 76 2e-13
BF01016B1E06 70 1e-11
BF14_335_C4 70 1e-11
>BF01031B2E06
Length = 707
Score = 101 bits (51), Expect = 3e-21
Identities = 163/199 (81%), Gaps = 1/199 (0%)
Strand = Plus / Plus
Query: 410 aaccaacaaccccaaagaccatgctattaagatcaataagtattaagaa-ctcactaagt 468
|||||||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct: 438 aaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaaga 497
Query: 469 ataggtttgaagtaaatttgtacgcgatagacatggaagcgagaagtataatagttaaat 528
||||||| | | ||||||||||||| |||| ||| |||||| | ||| || |||||
Sbjct: 498 ataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaat 557
Query: 529 cgctcttcaacgtactaaaagagttggggctatccagaactaacatcaatttattgttag 588
| ||| |||| |||||||| ||||| || |||||| |||||||||| | || ||||
Sbjct: 558 ctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaaataatctttag 617
Query: 589 aacgtacttcaaaggcagc 607
||| |||||| ||||||||
Sbjct: 618 aacatacttcgaaggcagc 636
>BF14_335_C2
Length = 1827
Score = 89.7 bits (45), Expect = 1e-17
Identities = 136/164 (82%), Gaps = 3/164 (1%)
Strand = Plus / Minus
Query: 509 gagaagtataatagttaaatcgctcttcaacgtactaaaagagttggggctatccagaac 568
|||| |||||| || |||||| |||| || | |||||||| | ||||| || ||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 569 taacatcaatttattgttagaacgtacttcaaaggcagccatagaatgttcgtttgaaat 628
||||| || || ||| || ||||||||||| ||| |||| ||| | |||||||| ||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 629 ttggtttagtagagagaggagctgggatggtggaggtgagcgtt 672
|||| |||| |||||||||||| ||| ||||||||||||||||
Sbjct: 987 ttgg-ttag--gagagaggagcttggacggtggaggtgagcgtt 947
>BF01043B1E03
Length = 830
Score = 75.8 bits (38), Expect = 2e-13
Identities = 100/120 (83%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 562 ccagaactaacatcaatttattgttagaacgtacttcaaaggcagccatagaatgttcgt 621
|||||||||||||||| | ||| || ||||||||| ||||||||| | ||| ||| ||
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgt 320
Query: 622 ttgaaatttggtttagtagagagaggagctgggatggtggaggtgagcgtttaacgcgcg 681
|| |||||||||| |||||||||||| || ||| |||||||||||| ||||||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcg 380
>BF01047B2H03
Length = 758
Score = 75.8 bits (38), Expect = 2e-13
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 258 aaaaagaaataacccaaaacaagcgatcaaaaggttttgggagagaaggcactagcacta 317
|||||||||||||| |||| ||||| || ||||||| |||||||| || ||| |||
Sbjct: 212 aaaaagaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggcta 153
Query: 318 gaaaatcacacgtcaagccttactctatccttaatgcggcttcggatttgactataat 375
||| ||| || |||||||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 152 taaagtcaaacatcaagccttactctatccttaaagcggtttcggattgcactataat 95
>BF14_335_C5
Length = 1597
Score = 75.8 bits (38), Expect = 2e-13
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 637 gtagagagaggagctgggatggtggaggtgagcgtttaacgcgcgataggtatgggctcc 696
||||||||||||||| ||| ||||||||||||||||||| ||||| ||| | |||| ||
Sbjct: 1440 gtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcgcc 1499
Query: 697 taatacctacacttggctcggaagtccaaggcattgttaaagctcctct 745
| | |||||||| ||| |||||| ||||| |||| ||||||||||
Sbjct: 1500 ttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctct 1548
>BF01016B1E06
Length = 606
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 625 aaatttggtttagtagagagaggagctgggatggtggaggtgagcgtttaacgcg 679
|||||||||| ||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 319 aaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
>BF14_335_C4
Length = 1491
Score = 69.9 bits (35), Expect = 1e-11
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 627 atttggtttagtagagagaggagctgggatggtggaggtgagcgtttaacgcgcgatagg 686
|||||||| ||||||||||||||| ||| || ||||||||||||||| ||||| ||
Sbjct: 1182 atttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaaga 1241
Query: 687 tatgggctcctaatacctacacttggctcggaagtccaaggcattgttaaagctcctct 745
|| ||| ||| | |||||||| ||| ||| |||||| ||||| |||| ||||||||||
Sbjct: 1242 taaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct 1300
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,178
Number of extensions: 4631
Number of successful extensions: 4631
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4628
Number of HSP's successfully gapped: 7
Length of query: 1310
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1293
Effective length of database: 8,119,229
Effective search space: 10498163097
Effective search space used: 10498163097
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)