BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09238 (UTR included)
(2683 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1D09 88 9e-17
BF14_736_C1 88 9e-17
BF01059B2F03 78 8e-14
BF14_2467_C1 78 8e-14
BF01026A1A12 70 2e-11
>BF01031B1D09
Length = 754
Score = 87.7 bits (44), Expect = 9e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1643 tctctcactcttaggacgaaatgcagccattacaggctacttcacgccgatcttctgtga 1702
|||||||||| | |||||||| |||||||| | ||||||||||||||||||| |||||||
Sbjct: 603 tctctcactcgtcggacgaaacgcagccataaaaggctacttcacgccgatcgtctgtga 544
Query: 1703 gagggtgg 1710
||||||||
Sbjct: 543 gagggtgg 536
>BF14_736_C1
Length = 796
Score = 87.7 bits (44), Expect = 9e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1643 tctctcactcttaggacgaaatgcagccattacaggctacttcacgccgatcttctgtga 1702
|||||||||| | |||||||| ||||||| || || ||||||||||||||||||||||||
Sbjct: 717 tctctcactcattggacgaaacgcagccactaaagactacttcacgccgatcttctgtga 658
Query: 1703 gagggtgg 1710
||||||||
Sbjct: 657 gagggtgg 650
>BF01059B2F03
Length = 703
Score = 77.8 bits (39), Expect = 8e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 1656 ggacgaaatgcagccattacaggctacttcacgccgatcttctgtgagagggtgg 1710
|||||||| ||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 9 ggacgaaactcagccattaaaggctacttcacgccgatcttctgtgagggggtgg 63
>BF14_2467_C1
Length = 1121
Score = 77.8 bits (39), Expect = 8e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 1644 ctctcactcttaggacgaaatgcagccattacaggctacttcacgccgatcttctgtgag 1703
||||||||| | |||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct: 330 ctctcactcatcggacgaaaaacagccattaaagactacttcacgccgatcttctgtgag 271
Query: 1704 agggtgg 1710
| |||||
Sbjct: 270 aaggtgg 264
>BF01026A1A12
Length = 759
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1644 ctctcactcttaggacgaaatgcagccattacaggctacttcacgccgatcttctgtgag 1703
||||||||| | ||||||| ||||||||| |||||||||||||||||||||||| |||
Sbjct: 491 ctctcactcatcagacgaaaaacagccattaaaggctacttcacgccgatcttctgggag 432
Query: 1704 agggtgg 1710
||||||
Sbjct: 431 ggggtgg 425
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,772
Number of extensions: 8409
Number of successful extensions: 8409
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 8409
Number of HSP's successfully gapped: 5
Length of query: 2683
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2666
Effective length of database: 8,119,229
Effective search space: 21645864514
Effective search space used: 21645864514
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)