BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09246 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_251_C1 1842 0.0
>BF14_251_C1
Length = 1605
Score = 1842 bits (929), Expect = 0.0
Identities = 959/968 (99%), Gaps = 1/968 (0%)
Strand = Plus / Plus
Query: 438 attatatctcaatctatattttggtttcgaatagtgaaccaggaagtaagcgtgcaagtg 497
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attatatctcnatctatattttggtttcgaatagtgaaccaggaagtaagcgtgcaagtg 60
Query: 498 aaaatgaacatagatttcgaggctatggctgtgttagaggaggaatctcaaaatgagtcg 557
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaatgaatatagatttcgaggctatggctgtgttagaggaggaatctcaaaatgagtcg 120
Query: 558 ctgggcgtgttcggctcgtctggggcgggcgtggtgacgggcgagaggcgagagagcggc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgggcgtgttcggctcgtctggggcgggcgtggtgacgggcgagaggcgagagagcggc 180
Query: 618 aagagaggtcgcaggccgggcagaaaggctcagctcgacaaacaggacatgaaggccaaa 677
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaggggtcgcaggccgggcagaaaggctcagctcgacaaacaggacatgaaggccaaa 240
Query: 678 ctggaacgcagtcgtcaatcagctcgggagtgtagagctcgcaagaagctccgctaccaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggaacgcagtcgtcaatcagctcgggagtgtagagctcgcaagaagctccgctaccaa 300
Query: 738 tacctcgaggagctggtcgctgatagagagagatcagtactcgcgctgagaaaggaactt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacctcgaggagctggtcgctgatagagagagatcagtactcgcgctgagaaaggaactt 360
Query: 798 gataagtactataaatggaatctggaattggatcaaggtcgtatgcccgagggtttggac 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gataagtactataaatggaatctggaattggatcaaggtcgtatgcccgagggtttggac 420
Query: 858 caactcctccaagagatgggggtggtcaaagaggaggtgaagatttaagattaaggtacc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caactcctccaagagatgggggtggtcaaagaggaggtgaagatttaagattaaggtacc 480
Query: 918 cccataacatacatatgtattatatataatatttatacatatacctccctacacattgaa 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cccataacatacatatgtattatatataatatttatacatatacctccctacacattgaa 540
Query: 978 gaatttggcgttaaaaaaaatccacgtgtcaaaaattaatcagtttgaagaaaaaacata 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatttggcgttaaaaaaaatccacgtgtcaaaaattaatcagtttgaagaaaaaacata 600
Query: 1038 cttttattttaaggtgtcaaaattatatgtggccttcgccaaaagaaaaaaaaatttctg 1097
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 601 cttttattttaaggtgtcaaaattatatgtggccttcgccaaaagaaaaaaaaa-ttctg 659
Query: 1098 aaccttatattcggatatgaaaaaaaaaactaaatttaatttctgatacctttctatgag 1157
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaccttatattcggatacgaaaaaaaaaactaaatttaatttctgatacctttctatgag 719
Query: 1158 gttatatttttgtatgaatattccttagtatatatcagccagtatgtaatatctttttga 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gttatatttttgtatgaatattccttagtatatatcagccagtatgtaatatctttttga 779
Query: 1218 atactttttcatttactacattagttataaaattcttataatctctataataatattatc 1277
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 atactttttcctttactacattagttataaaattcttataatctctataataatattatc 839
Query: 1278 ctctagaaatttcttttaaattaacaatatatttcgcataatccaatcatattttatttc 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctctagaaatttcttttaaattaacaatatatttcgcataatccaatcatattttatttc 899
Query: 1338 tttgtcatacgagtatatggttagatttattttgtatgttatatcatttaaaaaatgggt 1397
||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 900 tttgtcatacgagtatatggttaaatttattttgtatgttaaatcattaaaaaaatgggt 959
Query: 1398 gtagttat 1405
||||||||
Sbjct: 960 gtagttat 967
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,141
Number of extensions: 7192
Number of successful extensions: 7192
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7191
Number of HSP's successfully gapped: 1
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)