BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09248 (UTR included)
(2308 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B2H10 813 0.0
>BF01038B2H10
Length = 526
Score = 813 bits (410), Expect = 0.0
Identities = 428/434 (98%)
Strand = Plus / Plus
Query: 1314 atggcctgcacaaaacctggtatgtcagaacataacgtggctgctatattggagtactcc 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcctgcacaaaacctggtatgtcagaacataacgtggctgctatattggagtactcc 60
Query: 1374 tggcggacggggggcgcggaacacggggccttccccccggtactggcggggggagcgcga 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcggacggggggcgcggaacacggggccttccccccggtactggcggggggagcgcga 120
Query: 1434 gccactcacatacactatgtggccaacaaccaactcctcagacatggagagatgatactc 1493
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 gccactcacatacactatgtggccaacaaccaactcctgagacatggagagatgatactc 180
Query: 1494 gtggacgctgggacacaaagatggctgtacaattctgatatatcccgcacgtggcccgtg 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggacgctgggacacaaagatggctgtacaattctgatatatcccgcacgtggcccgtg 240
Query: 1554 tccgggaagttctctaagcaccagagaatactctacgaactgatactttcggtgcagaaa 1613
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 241 tccgggaagttctctaaacaccagagaatactctatgaactgatactttcagtgcagaaa 300
Query: 1614 cgtctgatcgacctgctgggtcagcatcggccgtctctggacacgttgttcgagcacatg 1673
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 301 cgtctgatcgacctgctgggtcagcatcggccgtctctggatacgttgttcgagcacatg 360
Query: 1674 tgtcgcctactgggaagccagctgcagcaggaggggatcataccgaagaatattgacaac 1733
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtcgcctactggggagccagctgcagcaggaggggatcataccgaagaatattgacaac 420
Query: 1734 aacgagcttatcgg 1747
||||||||||||||
Sbjct: 421 aacgagcttatcgg 434
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,931
Number of extensions: 5054
Number of successful extensions: 5054
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5054
Number of HSP's successfully gapped: 1
Length of query: 2308
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2291
Effective length of database: 8,119,229
Effective search space: 18601153639
Effective search space used: 18601153639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)