BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09251 (UTR included)
(2545 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1G11 1354 0.0
>BF01040B1G11
Length = 774
Score = 1354 bits (683), Expect = 0.0
Identities = 707/715 (98%)
Strand = Plus / Plus
Query: 399 aggatggctccaacaaggatcaatgacgctgttcattggtacatgtcaaatcttacttct 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aggatggctccaacaaggatcaatgacgctgttcattggtacatgtcaaatcttacttct 119
Query: 459 cggatcatagcaaggactggtatcccgtctgacagatatcatatgggaaaagttatactg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cggatcatagcaaggactggtatcccgtctgacagatatcatatgggaaaagttatactg 179
Query: 519 caatgtttaaaagactatcccgaggcagtgactcaaatcgatggagcgactggcgaatcg 578
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 180 caatgtttaaaagactatcccgaagcagtgactcaaattgatggagcgactggcgaatcg 239
Query: 579 gaaacaaacgaaaccattctagaaagatccgtgaaatgcgccacaagttttaggaaattt 638
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 240 gaaacaaacgaaaccattctagaaagatccgtgaaatgtgccacaagttttaggaaattt 299
Query: 639 ggtctgcaaagtatggatgtcattgtactgatggcaccgaatcacatacatctctgtata 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtctgcaaagtatggatgtcattgtactgatggcaccgaatcacatacatctctgtata 359
Query: 699 ccattctacgccgcactgtacacaggaaatgttatagccgctgtcgattttaatttgggg 758
||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 360 ccattctacgccgcattgtatacaggaaacgttatagccgctgtcgattttaatttgggg 419
Query: 759 aaaattgaactacagcaaacattagctgttttggaaccgaaaatcatattctgccaaagc 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaaattgaactacagcaaacattagctgttttggaaccgaaaatcatattctgccaaagc 479
Query: 819 tcgaaggcaccaacgatacaattagcattaaacgaaattgattccaatgcatttattgta 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcgaaggcaccaacgatacaattagcattaaacgaaattgattccaatgcatttattgta 539
Query: 879 gcttttgataaaggccattatctgtgtgatttcgactcatttatagataaattctatgac 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcttttgataaaggccattatctgtgtgatttcgactcatttatagataaattctatgac 599
Query: 939 ggaactacgattgaccaatttgaacccacagattttgatccagaggaagcaacggcattt 998
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 600 ggaactacgattgacgaatttgaacccacagattttgatccagaggaagcaacagcattt 659
Query: 999 ctggtgtctacgagtggcaccaccggattaccaaaagcagcagaagtgacccacaaaaac 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctggtgtctacgagtggcaccaccggattaccaaaagcagcagaagtgacccacaaaaac 719
Query: 1059 tttttaatatcactaccgaatctttttttacgttatacagagtttcctacaccta 1113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tttttaatatcactaccgaatctttttttacgttatacagagtttcctacaccta 774
Score = 107 bits (54), Expect = 9e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 183 gcggaggtgaacagtactttaattgattttgatcgcaatatatttacatactatcttaaa 242
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 1 gcggaggtgaacagtactttaattgattttgatcgcaatatatttatatattatcttaaa 60
Query: 243 gg 244
||
Sbjct: 61 gg 62
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,009
Number of extensions: 6795
Number of successful extensions: 6795
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6795
Number of HSP's successfully gapped: 2
Length of query: 2545
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2528
Effective length of database: 8,119,229
Effective search space: 20525410912
Effective search space used: 20525410912
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)