BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09256 (UTR included)
(1360 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2314_C1 716 0.0
>BF14_2314_C1
Length = 812
Score = 716 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Plus
Query: 421 ttggaactgtaaatatcccggtgatttgcaatttatttagtaaattctatctcaaccggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttggaactgtaaatatcccggtgatttgcaatttatttagtaaattctatctcaaccggt 61
Query: 481 cctatacatacatactaaatatgccgcatttaagaatcgaaacgaatgtatccaaaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cctatacatacatactaaatatgccgcatttaagaatcgaaacgaatgtatccaaaagta 121
Query: 541 aaatacctgaagacttcgtttctaaagcaattccaattttagcaaatagtcttgggaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaatacctgaagacttcgtttctaaagcaattccaattttagcaaatagtcttgggaaac 181
Query: 601 ctgctcaattttgtgtggtctcaattattcccgatgttcaaatgtgttttggtggttcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgctcaattttgtgtggtctcaattattcccgatgttcaaatgtgttttggtggttcca 241
Query: 661 atgctccatgtgccacagcaagtttaatgtcaatcggggctcttggtctgaatgaaaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atgctccatgtgccacagcaagtttaatgtcaatcggggctcttggtctgaatgaaaaca 301
Query: 721 aaaaacattcaaaagttttgtttgaattggttgaaaaagagctgggtattcctaaagaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaaacattcaaaagttttgtttgaattggttgaaaaagagctgggtattcctaaagaca 361
Query: 781 g 781
|
Sbjct: 362 g 362
Score = 184 bits (93), Expect = 2e-46
Identities = 102/105 (97%)
Strand = Plus / Plus
Query: 779 cagaatgtatataacataccaaaatgaaccatcctccaatgtcggtttcaagggaacaac 838
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 702 cagaatgtatataacataccaaaatgaaccgtcctccaatgtcggtttcaagggaacaac 761
Query: 839 attccatgatattattggatgatttctagcatcactcttatatat 883
|||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 762 attccatgatattattggataagttctagcatcactcttatatat 806
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,423
Number of extensions: 25186
Number of successful extensions: 25186
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 25186
Number of HSP's successfully gapped: 2
Length of query: 1360
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1343
Effective length of database: 8,119,229
Effective search space: 10904124547
Effective search space used: 10904124547
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)