BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09269 (UTR included)
(2479 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B1E02 1398 0.0
>BF01010B1E02
Length = 709
Score = 1398 bits (705), Expect = 0.0
Identities = 708/709 (99%)
Strand = Plus / Plus
Query: 1004 ggaaaacgagcaagaattggaaatggaacgacttgtatcagttcccattgaagcgatacc 1063
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ggaaaacgagcaagaattggaaatggaacgacttgtatcagctcccattgaagcgatacc 60
Query: 1064 agagaagaaagaagtgttgccagtggaagaagaaatacagttcgaaaacccaatggctag 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagaagaaagaagtgttgccagtggaagaagaaatacagttcgaaaacccaatggctag 120
Query: 1124 aaatatttacaatctcattatagagcagaagaacaagaagattactcgcaacgacctgtt 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatatttacaatctcattatagagcagaagaacaagaagattactcgcaacgacctgtt 180
Query: 1184 cgctccaggtcgtatggcttatgttgttgaattagatgatgaagggaccatagacagcga 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctccaggtcgtatggcttatgttgttgaattagatgatgaagggaccatagacagcga 240
Query: 1244 tataccaacaaccctgacgaggagcaaggcggatgttccggaaatggatgaacggacatc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tataccaacaaccctgacgaggagcaaggcggatgttccggaaatggatgaacggacatc 300
Query: 1304 aggctccgcctccaacgacgtggtcatcgagaagctgtctcagatattctcgtatttgag 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctccgcctccaacgacgtggtcatcgagaagctgtctcagatattctcgtatttgag 360
Query: 1364 acacgggcggcacaggaagcttaagaagacgaaggacaaaaatacagagaagggtcgcaa 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacgggcggcacaggaagcttaagaagacgaaggacaaaaatacagagaagggtcgcaa 420
Query: 1424 cgacgactctatatatggcgatattggggattatgtagcggatgacaggcaaagtgaccg 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgacgactctatatatggcgatattggggattatgtagcggatgacaggcaaagtgaccg 480
Query: 1484 acgcgatgaacgaccgaggactggatactttgacaaaccacaggagacagagaaggaaga 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgcgatgaacgaccgaggactggatactttgacaaaccacaggagacagagaaggaaga 540
Query: 1544 agggccacttgtaggtcgtcgtacggagcgcgaccgtcgctcggcggcgctcctgtcccg 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agggccacttgtaggtcgtcgtacggagcgcgaccgtcgctcggcggcgctcctgtcccg 600
Query: 1604 gttggcagcggagcccgagggctacgctgagtgttaccccgggctgagggaaatgaatga 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttggcagcggagcccgagggctacgctgagtgttaccccgggctgagggaaatgaatga 660
Query: 1664 cgccattgacgattcagacgacgaggtcgactacaccaagatggacgcc 1712
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgccattgacgattcagacgacgaggtcgactacaccaagatggacgcc 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,659
Number of extensions: 11673
Number of successful extensions: 11673
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11673
Number of HSP's successfully gapped: 1
Length of query: 2479
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2462
Effective length of database: 8,119,229
Effective search space: 19989541798
Effective search space used: 19989541798
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)