BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09280 (UTR included)
(6934 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01001X1D04 1417 0.0
BF01048A1B07 858 0.0
>BF01001X1D04
Length = 755
Score = 1417 bits (715), Expect = 0.0
Identities = 730/735 (99%)
Strand = Plus / Plus
Query: 4771 gccagtggacgttcagcttgcaacctatcatgtctgtcggcggcctggacgagacgtcgc 4830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gccagtggacgttcagcttgcaacctatcatgtctgtcggcggcctggacgagacgtcgc 71
Query: 4831 ctttaataaacggactcccagaccgcagcacgtccttagcgccgttaccctcgttgcctg 4890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctttaataaacggactcccagaccgcagcacgtccttagcgccgttaccctcgttgcctg 131
Query: 4891 gtgtacaaaccatacaaatgccgttaaacactatatgtagcaaccctgaaactccaggcg 4950
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 132 gtgtacaaaccatacaaatgccgttaaacacaatatgcagcaaccctgaaactccaggcg 191
Query: 4951 agccgcctcgcttgcaacagaagccgctgttgaaccccctggacccgagtactccgatcg 5010
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 192 agccgcctcgcttgcaacagaagccgctgttgaaccccttggacccgagtactccgatcg 251
Query: 5011 gtgcggttccacctccatccaccgctggacctctcacagctaaactaaaccagaacgctg 5070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtgcggttccacctccatccaccgctggacctctcacagctaaactaaaccagaacgctg 311
Query: 5071 ttaagctaacagacttctttcgaacacttctggaggacacattggataaagtggatgaac 5130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttaagctaacagacttctttcgaacacttctggaggacacattggataaagtggatgaac 371
Query: 5131 cagcagcccaggccaccttactgaagatgcagatagaacatatgcagtggagacacatgc 5190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagcagcccaggccaccttactgaagatgcagatagaacatatgcagtggagacacatgc 431
Query: 5191 aggagatcagggaaatgaaacacaaccacgaactgacagttacggaaatgcgagctgcgt 5250
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 432 aggagatcagggaaatgaaacacaaccatgaactgacagttacggaaatgcgagctgcgt 491
Query: 5251 acgagaaggacaaggcgcgtgctgttagtgaggcgcggcggacagctcaagtcgagctgg 5310
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 492 acgagaaggacaaggcgcgtgctgttagtgaggcgcggcggacagctcaagttgagctgg 551
Query: 5311 aggcagctgtaaaagccactaaggctaagcagtggtgtgctcattgtagtcaggaggccc 5370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aggcagctgtaaaagccactaaggctaagcagtggtgtgctcattgtagtcaggaggccc 611
Query: 5371 agttctactgctgttggaatacttcctactgcgactacccttgtcagaaagctcactgga 5430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agttctactgctgttggaatacttcctactgcgactacccttgtcagaaagctcactgga 671
Query: 5431 acactcattactcgcagtgcacacaacagaggaatgcagcaactaacggagataatgcta 5490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 acactcattactcgcagtgcacacaacagaggaatgcagcaactaacggagataatgcta 731
Query: 5491 acgcgatagaaaaaa 5505
|||||||||||||||
Sbjct: 732 acgcgatagaaaaaa 746
>BF01048A1B07
Length = 785
Score = 858 bits (433), Expect = 0.0
Identities = 448/453 (98%)
Strand = Plus / Plus
Query: 6030 ttcaatgaaacggattcagcgcatcactcgttcgacgatggcgtagatgtagtagacggt 6089
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ttcaacgaaacggattcagcgcatcactcgttcgaggatggcgtagatgtagtagacggt 60
Query: 6090 ctcgttaaaactaatggctacgacaaagaaaacatacagaagaaaacacagatgaactcg 6149
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgttaaaactaatggctacgacaaagaaaacatacagaagaaaacacagatgaactcc 120
Query: 6150 gttgacagcggcatatctaacataaacggccacgctgatattagtatgaagaacggtgac 6209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgacagcggcatatctaacataaacggccacgctgatattagtatgaagaacggtgac 180
Query: 6210 agaacattacagtcgcgactttcgaatctgtcgttgaaagagactgagaatatattgata 6269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaacattacagtcgcgactttcgaatctgtcgttgaaagagactgagaatatattgata 240
Query: 6270 agggacatgagcagcgatgaagatagatgcgaggactcgaacacgtcgccgcgtgtccac 6329
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 241 agggacatgagcagcgatgaagatagatgcgatgactcgaacacgtcgccgcgcgtccac 300
Query: 6330 aacgggcacggacaaaatggcgtcgataaaaagaacggagtgtcattgaatctcaaacta 6389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacgggcacggacaaaatggcgtcgataaaaagaacggagtgtcattgaatctcaaacta 360
Query: 6390 cagagcgaaatgaggttattatttaaggttttatatttgaaataacttcggctttaataa 6449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagagcgaaatgaggttattatttaaggttttatatttgaaataacttcggctttaataa 420
Query: 6450 ctttagatatcaatgtcaagattttcaggactt 6482
|||||||||||||||||||||||||||||||||
Sbjct: 421 ctttagatatcaatgtcaagattttcaggactt 453
Score = 319 bits (161), Expect = 3e-86
Identities = 173/177 (97%)
Strand = Plus / Plus
Query: 6578 ttatatttattaattttatcgaatactacttttaactaaatatatagatgctcgtgtaaa 6637
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 452 ttatattttttaattttatcgaatactacttttaactgaatatatagatgctcgtgtaaa 511
Query: 6638 cgttccgcagctttcaatcgcccacagtatggagcgcgcctctaggttgcgaggcggcgg 6697
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 512 cgttccgcagctttcaatcgcccacagtatggagcgcgcctataggttgcgaggcggcgg 571
Query: 6698 acacgtgtcgcgcgcccgacccaccctcaaccgagtcactcctagacacgttcagtt 6754
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 572 acacgtgtcgcgcgcccgacccaccctcaaccgagtcactcctagacaccttcagtt 628
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 160,083
Number of extensions: 30196
Number of successful extensions: 30196
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 30196
Number of HSP's successfully gapped: 3
Length of query: 6934
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6916
Effective length of database: 8,109,745
Effective search space: 56086996420
Effective search space used: 56086996420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)