BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09285 (UTR included)
(2659 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2F12 1112 0.0
>BF01022A2F12
Length = 628
Score = 1112 bits (561), Expect = 0.0
Identities = 602/613 (98%), Gaps = 7/613 (1%)
Strand = Plus / Minus
Query: 1740 gagcagttcccatgcagcttcgagtaccgacagtgcttcctcataacgctgttcgagcac 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gagcagttcccatgcagcttcgagtaccgacagtgcttcctcataacgctgttcgagcac 569
Query: 1800 gcctacgccagtcagtttggatcgttcttatgcgatagtgaccgcgagcggtccgcactg 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcctacgccagtcagtttggatcgttcttatgcgatagtgaccgcgagcggtccgcactg 509
Query: 1860 ggcgtttacgaccaaacgaccagcttgtggtcgtggatgaaccagcctgaagagctggcc 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggcgtttacgaccaaacgaccagcttgtggtcgtggatgaaccagcctgaagagctggcc 449
Query: 1920 gtgtacatcaaccccttgtatgaccccacgcatgacgtcatctggccgtcggtggcaccc 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtgtacatcaaccccttgtatgaccccacgcatgacgtcatctggccgtcggtggcaccc 389
Query: 1980 atgagctatgttatatgggaagagctctatttacgctggttggtgaaacaacgtacagag 2039
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 388 atgagctatgttatatgggaagagctctatttacgctggttggtgaaacaacgtacggag 329
Query: 2040 gaaaaggaggaactgtacagagtaattcgaactagagagcaagcgttaagggctcaggcg 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gaaaaggaggaactgtacagagtaattcgaactagagagcaagcgttaagggctcaggcg 269
Query: 2100 caacaattacggcgagaactgaatgacctcgcgcagcagtattacgctcaagataagtga 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caacaattacggcgagaactgaatgacctcgcgcagcagtattacgctcaagataagtga 209
Query: 2160 ggtcaagttttactggtttcgatatcttttgccatatatgttgtgctttgtcacttgtta 2219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggtcaagttttactggtttcgatatcttttgccatatatgttgtgctttgtcacttgtta 149
Query: 2220 atcatttgatggatatattgaaagggttttcgtttatat-tttctgataggaaacacaca 2278
||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 148 atcatttgatggatatattgaaagggttttcgtttatatgtttcgtaaaggaaacacaca 89
Query: 2279 gggatg-----tattt-aatactttgtttataaaatccggaaacaatattatgcatactt 2332
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gggatgaaatatatttaaatactttgtttataaaatccggaaacaatattatgcatactt 29
Query: 2333 ttgttaaaaaaaa 2345
|||||||||||||
Sbjct: 28 ttgttaaaaaaaa 16
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,920
Number of extensions: 6169
Number of successful extensions: 6169
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6167
Number of HSP's successfully gapped: 1
Length of query: 2659
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2642
Effective length of database: 8,119,229
Effective search space: 21451003018
Effective search space used: 21451003018
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)