BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09287 (UTR included)
(2893 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1G08 1400 0.0
>BF01043A1G08
Length = 757
Score = 1400 bits (706), Expect = 0.0
Identities = 718/722 (99%)
Strand = Plus / Plus
Query: 901 tgtacgatgattactataggaatgagggaatctacgtcccggacgggattaaagccgttg 960
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 36 tgtacgatgattactataggaatgagggaatctacgtcccagacgggattaaagccgttg 95
Query: 961 aaagcggtgtacagtcattgtcgctctgtgagcataagagcgataaagatcgtacgcccg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aaagcggtgtacagtcattgtcgctctgtgagcataagagcgataaagatcgtacgcccg 155
Query: 1021 aactcaaagatgtttcaagtggatcgcaacccaaaaagatgacttgggcttcaatagcca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aactcaaagatgtttcaagtggatcgcaacccaaaaagatgacttgggcttcaatagcca 215
Query: 1081 gccaaccagctaagccaactccgttaacacagagcggagggctcaagaagaagggacctg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gccaaccagctaagccaactccgttaacacagagcggagggctcaagaagaagggacctg 275
Query: 1141 gaatgccaccaccgccgataattccagggaaacataacatggatatcagcacatgggatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaatgccaccaccgccgataattccagggaaacataacatggatatcagcacatgggatg 335
Query: 1201 ctgggaagaatgcacctgttgcgagtgcaccgccgccatcgcttcagccgccgccggttc 1260
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctgggaagaatgctcctgttgcgagtgcaccgccgccatcgcttcagccgccgccggttc 395
Query: 1261 ctgctcctctaccgatgccgcagccggcgccaacgtcagctccactacaacgtggaccac 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctgctcctctaccgatgccgcagccggcgccaacgtcagctccactacaacgtggaccac 455
Query: 1321 caccgcagcaccaaccgccgccctcctggactcatactcctcgagctcctccaccgatgc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 caccgcagcaccaaccgccgccctcctggactcatactcctcgagctcctccaccgatgc 515
Query: 1381 aaccgcgccccatggttcccccaccgattgtccccggtccaccacaaaccgcccatcccg 1440
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 516 aaccgcgccccatggttcccccaccgattgtccccggtcctccacaaaccgcccatcccg 575
Query: 1441 ttctagaagagctacgcgtcaagaatgaatataatcccaaggagttcgatctaagtgctc 1500
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttctagaagagctacgtgtcaagaatgaatataatcccaaggagttcgatctaagtgctc 635
Query: 1501 caaatgctaggttctttgtgattaagtcgtattcggaagatgacattcaccgtagtatca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 caaatgctaggttctttgtgattaagtcgtattcggaagatgacattcaccgtagtatca 695
Query: 1561 aatacgaaatctggtgcagcacagaacatgggaacaagcgtcttgatgctgcgtataggg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aatacgaaatctggtgcagcacagaacatgggaacaagcgtcttgatgctgcgtataggg 755
Query: 1621 ac 1622
||
Sbjct: 756 ac 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,119
Number of extensions: 23237
Number of successful extensions: 23237
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 23237
Number of HSP's successfully gapped: 1
Length of query: 2893
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2875
Effective length of database: 8,109,745
Effective search space: 23315516875
Effective search space used: 23315516875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)