BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09295 (UTR included)
(1303 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 92 3e-18
BF01056B1D02 86 2e-16
BF01037B1H08 78 4e-14
BF01040A1G09 76 2e-13
>BF01023A2A12
Length = 723
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 129 atcatcatcatcatcagcctatcgaagccaactgctgagcagaggcctcttctcacatgg 188
|||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||
Sbjct: 348 atcatcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatgg 289
Query: 189 agaagg 194
||||||
Sbjct: 288 agaagg 283
>BF01056B1D02
Length = 778
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 129 atcatcatcatcatcagcctatcgaagccaactgctgagcagaggcctcttctcacatg 187
|||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 746 atcatcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg 688
>BF01037B1H08
Length = 758
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 132 atcatcatcatcagcctatcgaagccaactgctgagcagaggcctcttctcacatggaga 191
||||||| ||||||||||||| |||| || |||||||| ||||||||||||||||| |||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 192 agg 194
|||
Sbjct: 289 agg 287
>BF01040A1G09
Length = 753
Score = 75.8 bits (38), Expect = 2e-13
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 130 tcatcatcatcatcagcctatcg-aagccaactgctgagcagaggcctcttctcacatgg 188
||||||||||||||||||||||| |||||| |||||||||| | |||||||||| |||||
Sbjct: 139 tcatcatcatcatcagcctatcggaagcca-ctgctgagcataagcctcttctcgcatgg 81
Query: 189 agaagg 194
||||||
Sbjct: 80 agaagg 75
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,088
Number of extensions: 5353
Number of successful extensions: 5353
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5351
Number of HSP's successfully gapped: 4
Length of query: 1303
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1286
Effective length of database: 8,119,229
Effective search space: 10441328494
Effective search space used: 10441328494
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)