BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09299 (UTR included)
(3516 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A2B01 868 0.0
>BF01037A2B01
Length = 815
Score = 868 bits (438), Expect = 0.0
Identities = 441/442 (99%)
Strand = Plus / Plus
Query: 2353 cagtatgaacttcgagaacaagccacagagcacgccgtacacgtcacaagatttacaaga 2412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtatgaacttcgagaacaagccacagagcacgccgtacacgtcacaagatttacaaga 60
Query: 2413 taaatcgaaagctaaccgaacagtgactttttgtgaacaaatattagaaaagagtccaga 2472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaatcgaaagctaaccgaacagtgactttttgtgaacaaatattagaaaagagtccaga 120
Query: 2473 gactagcgaggataaatccgaaaacacgaccgttggaaacgaaaccacagtcatcagcaa 2532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gactagcgaggataaatccgaaaacacgaccgttggaaacgaaaccacagtcatcagcaa 180
Query: 2533 tgacagtacagtcatcaagactgaagcgggagaggctgatgactccgccaataagacgga 2592
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 tgacagtacagtcatcaagactgaagctggagaggctgatgactccgccaataagacgga 240
Query: 2593 agtggaaccagacggtccccataccacttggggtatattcgacagtgagggcggagttct 2652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtggaaccagacggtccccataccacttggggtatattcgacagtgagggcggagttct 300
Query: 2653 agaggacaggcattggggtgtctcactgattatcccgccaaaagccatcgcaccgggcat 2712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaggacaggcattggggtgtctcactgattatcccgccaaaagccatcgcaccgggcat 360
Query: 2713 caagcaaaagatctattttaccgtgtcagaccctcgactgagccagcgggttggtggacc 2772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagcaaaagatctattttaccgtgtcagaccctcgactgagccagcgggttggtggacc 420
Query: 2773 ccccatcgacctcgataacggt 2794
||||||||||||||||||||||
Sbjct: 421 ccccatcgacctcgataacggt 442
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,441
Number of extensions: 7423
Number of successful extensions: 7423
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7423
Number of HSP's successfully gapped: 1
Length of query: 3516
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3498
Effective length of database: 8,109,745
Effective search space: 28367888010
Effective search space used: 28367888010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)