BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09330 (UTR included)
(3553 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A2E10 1485 0.0
>BF01037A2E10
Length = 786
Score = 1485 bits (749), Expect = 0.0
Identities = 776/786 (98%)
Strand = Plus / Plus
Query: 476 agtagctgttaaaacacttaaaaagatggaaaattatattgttctgtcatttattggtga 535
|||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 agtaactgttaaaatactttaaaagatggnnnattatattgttctgtcatttattggtga 60
Query: 536 aggatcattcggtcgagtttttaaagccaagcacaaagatactgatggtattgtagcttt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggatcattcggtcgagtttttaaagccaagcacaaagatactgatggtattgtagcttt 120
Query: 596 aaaagttataagaaagaaaggaagatcctcaaaggacttaaaaaacttaagacaagaatg 655
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 121 aaaagttataagaaagaaaggaagatcctcaaaggatttaaaaaacttaagacaggaatg 180
Query: 656 tgatattcaaaggcaactggatcatccaaatattattcgaatgatcgatagttttgacac 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatattcaaaggcaactggatcatccaaatattattcgaatgatcgatagttttgacac 240
Query: 716 tgaatcggaactggtagttgtgaccgagtatgcagaaaaggaattacacagtattctagc 775
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatcggaactggtagttgtgactgagtatgcagaaaaggaattacacagtattctagc 300
Query: 776 caaggaaggatgtctcaatgaagaggaagtaaagaaagtgacctgggatttggtatctgc 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaggaaggatgtctcaatgaagaggaagtaaagaaagtgacctgggatttggtatctgc 360
Query: 836 cttgtattatttacattcccatagagtgcttcatagagacctaaaaccacaaaatgttct 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttgtattatttacattcccatagagtgcttcatagagacctaaaaccacaaaatgttct 420
Query: 896 gttagacagcacaggaaaagctaaactttgtgattttggtctggcaagaataatgactaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttagacagcacaggaaaagctaaactttgtgattttggtctggcaagaataatgactaa 480
Query: 956 tgctacccacattctgacatcaataaaaggtacaccattatacatggcaccggagcttat 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctacccacattctgacatcaataaaaggtacaccattatacatggcaccggagcttat 540
Query: 1016 tgatgaaaagccatatgatcatcaggcagatctttggtcacttggttgtatagtgtatga 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgatgaaaagccatatgatcatcaggcagatctttggtcacttggttgtatagtgtatga 600
Query: 1076 gttgatggctggtcaaccaccattctgcacaatgtcaatttggcagctcgtccgtatgat 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttgatggctggtcaaccaccattctgcacaatgtcaatttggcagctcgtccgtatgat 660
Query: 1136 aaggcataaaccagtgcaatggcctagttttattacagctgaggcgagatcttttctgca 1195
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaggcataaaccagtccaatggcctagttttattacagctgaggcgagatcttttctgca 720
Query: 1196 gggccttctgcataaagacccatctaaaagaatgtcttggtctgaaattcttgaacatcc 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggccttctgcataaagacccatctaaaagaatgtcttggtctgaaattcttgaacatcc 780
Query: 1256 atatgt 1261
||||||
Sbjct: 781 atatgt 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 464,758
Number of extensions: 10421
Number of successful extensions: 10421
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10421
Number of HSP's successfully gapped: 1
Length of query: 3553
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3535
Effective length of database: 8,109,745
Effective search space: 28667948575
Effective search space used: 28667948575
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)