BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09331 (UTR included)
(2260 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2C12 1388 0.0
>BF01029A2C12
Length = 719
Score = 1388 bits (700), Expect = 0.0
Identities = 706/708 (99%)
Strand = Plus / Plus
Query: 1324 cacattctcccacaaaagatgttcacctgaacgggtacagaattcctgctggttcccaag 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cacattctcccacaaaagatgttcacctgaacgggtacagaattcctgctggttcccaag 71
Query: 1384 tcgttcctcttatcaattgtgtacatatggatccaaacctctgggacgagcccaacaagt 1443
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcgttcctcttatcaactgtgtacatatggatccaaacctctgggacgagcccaacaagt 131
Query: 1444 tcaatccaagtcgatttatagatgaaaatggaaaaattaagcgacccgagtactttatgc 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcaatccaagtcgatttatagatgaaaatggaaaaattaagcgacccgagtactttatgc 191
Query: 1504 cgtttggagtcggacgtcgtatgtgcctaggggatgttttggcaagaatggaaatgttta 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgtttggagtcggacgtcgtatgtgcctaggggatgttttggcaagaatggaaatgttta 251
Query: 1564 tgttcttcgcaagtttgatgcatcaattcgatgttcaaaccgaggcgggtgcagcgccac 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgttcttcgcaagtttgatgcatcaattcgatgttcaaaccgaggcgggtgcagcgccac 311
Query: 1624 catctctagaaggaacggtgggtgccacaatctcgccacagcctttccgcgtcaagttcg 1683
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgtctctagaaggaacggtgggtgccacaatctcgccacagcctttccgcgtcaagttcg 371
Query: 1684 tgcctcgttcgccaccagctccgcctgttgtcctggtccacgagcatccacacttgcgcc 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcctcgttcgccaccagctccgcctgttgtcctggtccacgagcatccacacttgcgcc 431
Query: 1744 atgttggttcgcattaagcgttctgatgatattgccactacatacccaccagtattccat 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgttggttcgcattaagcgttctgatgatattgccactacatacccaccagtattccat 491
Query: 1804 gatcactcgttttagagcgcatcgatgataaatttaattaagttataagtaagtgacgac 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatcactcgttttagagcgcatcgatgataaatttaattaagttataagtaagtgacgac 551
Query: 1864 atcgctgcggtgaatgtcgaggctgtgcataaagtgttcaattaaatagtaaacagaact 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atcgctgcggtgaatgtcgaggctgtgcataaagtgttcaattaaatagtaaacagaact 611
Query: 1924 ttactttagatgtactaaaattcccatcgtcgagattatgaattgttaatttataacttc 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttactttagatgtactaaaattcccatcgtcgagattatgaattgttaatttataacttc 671
Query: 1984 agtattatgtatagattttgatctatgagatcttcaatcacatacatc 2031
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agtattatgtatagattttgatctatgagatcttcaatcacatacatc 719
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,781
Number of extensions: 3882
Number of successful extensions: 3882
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3882
Number of HSP's successfully gapped: 1
Length of query: 2260
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2243
Effective length of database: 8,119,229
Effective search space: 18211430647
Effective search space used: 18211430647
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)