BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09342 (UTR included)
(6109 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_300_C1 4341 0.0
>BF14_300_C1
Length = 2252
Score = 4341 bits (2190), Expect = 0.0
Identities = 2226/2238 (99%)
Strand = Plus / Plus
Query: 3589 agtgcgcggaggtggaattctgtcagctgcagggctgcccgcttaactcccactgccgca 3648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtgcgcggaggtggaattctgtcagctgcagggctgcccgcttaactcccactgccgca 61
Query: 3649 atctggaccgcggctacgaatgcgtctccaatgccaccttcgacggcgtcgacacggtcc 3708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atctggaccgcggctacgaatgcgtctccaatgccaccttcgacggcgtcgacacggtcc 121
Query: 3709 tcagctaccggctgcgggagccgggcggcgcacacgcgctggacccgcccgcgccgcccg 3768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcagctaccggctgcgggagccgggcggcgcacacgcgctggacccgcccgcgccgcccg 181
Query: 3769 cctcgctcaccctcacctatcgcagcaaggccggcggcacgctgttccgcgcagagcgcg 3828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctcgctcaccctcacctatcgcagcaaggccggcggcacgctgttccgcgcagagcgcg 241
Query: 3829 aggacggcgaggacgccgtgtttagcgtcggactctacaacggccaggtcggcgtgcaat 3888
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagacggcgaggacgccgtgtttagcgtcggactctacaacggccaggtcggcgtgcaat 301
Query: 3889 ggcggctgggcggactgccggcgcagcgccgcatgcgactcaggcgccccggcctcgcct 3948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggcggctgggcggactgccggcgcagcgccgcatgcgactcaggcgccccggcctcgcct 361
Query: 3949 gggtcacgctgcgactcacgctggcagacggaaggatcaacgggtctttcgtggacgccg 4008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gggtcacgctgcgactcacgctggcagacggaaggatcaacgggtctttcgtggacgccg 421
Query: 4009 acggccacgaggagctgggcctgtccgacgacatcgacgtggcggcctggcagcgtctcg 4068
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 422 acggccacgaggagctgggcctgtccgacgacatcgacgtggcggcttggcagcgtctcg 481
Query: 4069 tcacgaccggactcatcacgctgggaggcgtgcgacccagtccgcgaccacccctcacca 4128
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcaccaccggactcatcacgctgggaggcgtgcgacccagtccgcgaccacccctcacca 541
Query: 4129 ccaccacctccaccaccaccatcctaccggccatggagaattccacggacccgaatgtta 4188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccaccacctccaccaccaccatcctaccggccatggagaattccacggacccgaatgtta 601
Query: 4189 tggagtactccgaggatgacctcatagatgacaacttggccggagaatatttcaaaggct 4248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tggagtactccgaggatgacctcatagatgacaacttggccggagaatatttcaaaggct 661
Query: 4249 gcctgggagcggttcacgtgggcggcttgctgctgcccttcttcacggaggagcagttgt 4308
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gcctgggagcggtccacgttggcggcttgctgctgcccttcttcacggaggagcagttgt 721
Query: 4309 tcgtggggtcggcggcgacgttgctcgccgcccagcctcactacgcactgctcgggggcg 4368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tcgtggggtcggcggcgacgttgctcgccgcccagcctcactacgcactgctcgggggcg 781
Query: 4369 aaccctggggagcctccgagggcgcgggctgtgtgctgtgtgtggaggcgcagtgccagc 4428
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caccctggggagcctccgagggcgcgggctgtgtgctgtgtgtggaggcgcagtgccagc 841
Query: 4429 ggggtgcgcactgccaggacgtgcggaactcgtacgcctgcgcctgtcctcccgggtacg 4488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ggggtgcgcactgccaggacgtgcggaactcgtacgcctgcgcctgtcctcccgggtacg 901
Query: 4489 ccggcgactactgcgagcgagacatcgacgagtgcctccaccacgactgtcggaacggcg 4548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ccggcgactactgcgagcgagacatcgacgagtgcctccaccacgactgtcggaacggcg 961
Query: 4549 ccacctgcaaggacgaagtcgccaagtacagctgcctctgtcccgccggctacgacggag 4608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ccacctgcaaggacgaagtcgccaagtacagctgcctctgtcccgccggctacgacggag 1021
Query: 4609 acctgtgtgaaaacgacatcgacgagtgcgcgtccggtccgtgcggtcacggggcgacct 4668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 acctgtgtgaaaacgacatcgacgagtgcgcgtccggtccgtgcggtcacggggcgacct 1081
Query: 4669 gtgtggacgagccgggcggcttccgctgcgagtgtccggccgagtggcgcggggtccgct 4728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 gtgtggacgagccgggcggcttccgctgcgagtgtccggccgagtggcgcggggtccgct 1141
Query: 4729 gcgactcgcccgccgccaccacctgccgccacgcgccctgcgccaacgacgcgcagtgtc 4788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gcgactcgcccgccgccaccacctgccgccacgcgccctgcgccaacgacgcgcagtgtc 1201
Query: 4789 aggacacgcccgatccggtgaccgggaacaactacacgtgttcgtgcggcgcggactacg 4848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 aggacacgcccgatccggtgaccgggaacaactacacgtgttcgtgcggcgcggactacg 1261
Query: 4849 cgggcgtccactgcgagctggcgttctgcgaggtgacggcctgcgtccacggcgcgtgcg 4908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 cgggcgtccactgcgagctggcgttctgcgaggtgacggcctgcgtccacggcgcgtgcg 1321
Query: 4909 cgtcggaaactcgacccccgacgtgctcgtgcagggcgggctggggcggacggctgtgcg 4968
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 cgtcggaaactcgacccccggcgtgctcgtgcagggcgggctggggcggacggctgtgcg 1381
Query: 4969 acgaggagcgggacgagtgcgcggacgccgcctgtctgcatggggcgcgctgtgtgccca 5028
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1382 acgaggagcgggacgagtgcgcggacgccgcctgtctgcacggggcgcgctgtgtgccca 1441
Query: 5029 ccagaccgcccacgtgcgactgcccaccagagtggcgcggagctcgctgtgagctggacg 5088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 ccagaccgcccacgtgcgactgcccaccagagtggcgcggagctcgctgtgagctggacg 1501
Query: 5089 tggacgagtgcagcgagcgacccgtcagctgcggcccggggctgtgccggaacctgcccg 5148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 tggacgagtgcagcgagcgacccgtcagctgcggcccggggctgtgccggaacctgcccg 1561
Query: 5149 ggacatacacatgcgagtgtccggagggcttctgtggcgacggatgcgtgctgcctgacc 5208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 ggacatacacatgcgagtgtccggagggcttctgtggcgacggatgcgtgctgcctgacc 1621
Query: 5209 cttgtgtgcgatgggaggcggcgacggagcggggggaggagggggacggaggccccgggc 5268
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1622 cgtgtgtgcgatgggaggcggcgacggagcggggcgaggagggggacggaggccccgggc 1681
Query: 5269 cctgtctgcacggaggacggtgcgagcagcgctgtggctcagaagtggactacatgtgtc 5328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 cctgtctgcacggaggacggtgcgagcagcgctgtggctcagaagtggactacatgtgtc 1741
Query: 5329 actgtgtggacggctggggcggcaagaactgctctcgtagggtggaggccagcgaggcga 5388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 actgtgtggacggctggggcggcaagaactgctctcgtagggtggaggccagcgaggcga 1801
Query: 5389 ccggcggggtgtcccgagcggcgcggtgggcgctcggcgcgggcggagcgctgctggcgc 5448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 ccggcggggtgtcccgagcggcgcggtgggcgctcggcgcgggcggagcgctgctggcgc 1861
Query: 5449 tgctgctggcggccggggcgctggcggcgctcgcggcacaggcccgccggaagagagcca 5508
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1862 tgctgctggcggccggggcgctggcggcgctcgcggcacaggcccgccggaagagagcta 1921
Query: 5509 ccagaggaacatactcgccctccggacaggagtactgcaacccgcgcgccgaaatgatca 5568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 ccagaggaacatactcgccctccggacaggagtactgcaacccgcgcgccgaaatgatca 1981
Query: 5569 cgcacgcgctcaagccgccgcccgaggagaggctcatatagcatccacaacaacgacgaa 5628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1982 cgcacgcgctcaagccgccgcccgaggagaggctcatatagcatccacaacaacgacgaa 2041
Query: 5629 gacaggaaggggccgggacccgccgccttccagctccacgaggtgtcggcggaactgctg 5688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2042 gacaggaaggggccgggacccgccgccttccagctccacgaggtgtcggcggaactgctg 2101
Query: 5689 cacgatggacttacagtattgtcgacgatagatcaacgtgtccgatgtagtctgacggga 5748
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2102 cacggtggacttacagtattgtcgacgatagatcaacgtgtccgatgtagtctgacggga 2161
Query: 5749 gacactccgcacttgatgaattgtaatccttccaattagtttatttcagtagaatgtaaa 5808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2162 gacactccgcacttgatgaattgtaatccttccaattagtttatttcagtagaatgtaaa 2221
Query: 5809 aggattcgggaactaaca 5826
||||||||||||||||||
Sbjct: 2222 aggattcgggaactaaca 2239
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 54,440
Number of extensions: 6300
Number of successful extensions: 6300
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6289
Number of HSP's successfully gapped: 1
Length of query: 6109
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6091
Effective length of database: 8,109,745
Effective search space: 49396456795
Effective search space used: 49396456795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)