BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09349 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1H02 92 3e-18
BF01058B2C06 90 1e-17
BF01025A1A12 86 2e-16
BF01042A2B06 76 2e-13
BF01019B1G10 76 2e-13
BF01012A1B09 76 2e-13
BF01012B1C01 74 6e-13
BF01021B1F09 72 3e-12
BF14_729_C3 72 3e-12
BF01029B1H01 68 4e-11
>BF01062A1H02
Length = 876
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 21 aagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagtaatcc 80
|||||||||||| ||| |||||||||||||||||||| || ||||| || | |||||||
Sbjct: 301 aagtaaccgaaacttcgtgagtatgtagtttttaaaatgatgaaatacgctttgtaatcc 360
Query: 81 gaaaatattagttttatttaaa 102
|||||||||||||| |||||||
Sbjct: 361 gaaaatattagtttcatttaaa 382
>BF01058B2C06
Length = 772
Score = 89.7 bits (45), Expect = 1e-17
Identities = 79/89 (88%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 13 ctgcagcaaagtaaccgaaatgtcgggagtatgtagttttta-aaataataaaataagcg 71
|||||||||||||||||||| ||||||| ||||||||||| | ||| |||||| | |||
Sbjct: 460 ctgcagcaaagtaaccgaaacgtcgggaatatgtagttttaacaaaaaataaagcacgcg 401
Query: 72 tagtaatccgaaaatattagttttattta 100
|||||||| |||||||||||||| |||||
Sbjct: 400 tagtaatcagaaaatattagtttcattta 372
>BF01025A1A12
Length = 880
Score = 85.7 bits (43), Expect = 2e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 29 gaaatgtcgggagtatgtagtttttaaa-ataataaaataagcgtagtaatccgaaaata 87
|||| ||||||||||||||||||||||| ||||||||||| ||| || |||||||||||
Sbjct: 158 gaaacgtcgggagtatgtagtttttaaacataataaaatacgcgaagctatccgaaaata 99
Query: 88 ttagttttatttaaa 102
||||||| |||||||
Sbjct: 98 ttagtttcatttaaa 84
>BF01042A2B06
Length = 781
Score = 75.8 bits (38), Expect = 2e-13
Identities = 76/87 (87%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 21 aagtaaccgaaatgtcgggagtatgtagtttttaaaataa----taaaataa-gcgtagt 75
|||||||||||| |||| |||||||||||||| ||||||| | |||||| |||||||
Sbjct: 256 aagtaaccgaaacgtcgtgagtatgtagttttaaaaataaataattaaataacgcgtagt 315
Query: 76 aatccgaaaatattagttttatttaaa 102
||||||||||||||| ||| |||||||
Sbjct: 316 aatccgaaaatattactttaatttaaa 342
>BF01019B1G10
Length = 488
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 20 aaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagtaa 77
|||| |||||||| ||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 374 aaaggaaccgaaacgtcgggattatgtagtttttaaaataataaaattcgcgtagtaa 317
>BF01012A1B09
Length = 841
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/86 (89%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 20 aaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagt-aat 78
||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||| ||
Sbjct: 820 aaagtaaccgaaacgtcgggattatgtag-ttttaaaataataaaatccgcgtagtgtat 762
Query: 79 ccgaaa-atattagttttatttaaat 103
|||||| |||||||||| ||||||||
Sbjct: 761 ccgaaatatattagtttcatttaaat 736
>BF01012B1C01
Length = 950
Score = 73.8 bits (37), Expect = 6e-13
Identities = 80/92 (86%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 13 ctgcagcaaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataa-gcg 71
|||| ||||||||||||||| ||||||||| ||||| || ||| ||||||||||| ||
Sbjct: 675 ctgctgcaaagtaaccgaaacgtcgggagtgtgtag--ttgaaactaataaaataactcg 732
Query: 72 tagtaatccgaaaatattagttttatttaaat 103
|||||||| ||||||||||||| ||||||||
Sbjct: 733 tagtaatcgtaaaatattagtttcatttaaat 764
>BF01021B1F09
Length = 792
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 20 aaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagt 75
||||||||||||| | |||||| | ||||||||||||||||||||||| |||||||
Sbjct: 684 aaagtaaccgaaacgacgggagcacgtagtttttaaaataataaaatacgcgtagt 629
>BF14_729_C3
Length = 2041
Score = 71.9 bits (36), Expect = 3e-12
Identities = 78/88 (88%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 18 gcaaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagta- 76
||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||||||
Sbjct: 1615 gcaaagtaaccgaaacgtcgggattatgtagttttt-aaataataaaatccgcgtagtat 1673
Query: 77 atccgaa-aatattagttttatttaaat 103
||||||| |||| ||| || ||||||||
Sbjct: 1674 atccgaataatactagcttcatttaaat 1701
>BF01029B1H01
Length = 700
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 20 aaagtaaccgaaatgtcgggagtatgtagtttttaaaataataaaataagcgtagtaatc 79
||||||||||||| ||||| ||||| | ||||||||||||||||||| |||||||||||
Sbjct: 640 aaagtaaccgaaacgtcggcagtata-attttttaaaataataaaatacgcgtagtaatc 698
Query: 80 cg 81
||
Sbjct: 699 cg 700
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,947
Number of extensions: 4621
Number of successful extensions: 4621
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 4615
Number of HSP's successfully gapped: 10
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)