BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09351 (UTR included)
(2005 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1D09 731 0.0
>BF01031B1D09
Length = 754
Score = 731 bits (369), Expect = 0.0
Identities = 384/389 (98%)
Strand = Plus / Plus
Query: 453 aaggtgtttttcatatgttttagaaacggtgtttgttgtttagaataaatggcgagacag 512
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 88 aaggtgtttttcatatgttttagaaacggtgtttgttgtttaaaataaatggcgagacag 147
Query: 513 atcgctgatgttgagattcatgcgagcgacactcgagacttagacgacgataatctcgat 572
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 148 atcgctgatgttgagattcatgcgagcgacacgcgagacttagacgacgataatctcgat 207
Query: 573 gttagtgtcgacctcattgacgatgggctgtatttaggtaacctagcatgtgcaagagat 632
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 208 gttagtgtcgacctcattgacgatggtctgtatttaggtaacctagcatgtgcaagagat 267
Query: 633 cacaaaactctggaacagctgggtgtgactcacatcctcactgttgacctggtgccattg 692
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 268 cacaaaactctggaacagctgggtgtgactcatatcctcactgttgacctggtgccattg 327
Query: 693 cccaggtcgatattggatcaaaccagtctcatcatcaaatatattaaattggcagatgtg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cccaggtcgatattggatcaaaccagtctcatcatcaaatatattaaattggcagatgtg 387
Query: 753 ccaaaagaagacctcatcactcacctgccagaatgtaatgattttattaaggattccata 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccaaaagaagacctcatcactcacctgccagaatgtaatgattttattaaggattccata 447
Query: 813 gcaaatggcggaaaagttttagtacattg 841
|||| ||||||||||||||||||||||||
Sbjct: 448 gcaagtggcggaaaagttttagtacattg 476
Score = 161 bits (81), Expect = 5e-39
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 294 gttgttaataagagtggagttatttatatttatacaacatttaatcttgtatgacaatat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gttgttaataagagtggagttatttatatttatacaacatttaatcttgtatgacaatat 68
Query: 354 attatcaattgatttccaaaaggtg 378
||||| |||||||||||||||||||
Sbjct: 69 attattaattgatttccaaaaggtg 93
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,355
Number of extensions: 5842
Number of successful extensions: 5842
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5842
Number of HSP's successfully gapped: 2
Length of query: 2005
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1988
Effective length of database: 8,119,229
Effective search space: 16141027252
Effective search space used: 16141027252
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)