BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09363 (UTR included)
(1546 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1153_C1 1570 0.0
BF14_178_C1 123 9e-28
>BF14_1153_C1
Length = 805
Score = 1570 bits (792), Expect = 0.0
Identities = 801/804 (99%)
Strand = Plus / Plus
Query: 394 ttaagtaggtatttacttaaaattaaattcaaaataaaaattatttctttaacaatatag 453
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 2 ttaagtaggtatttacttaaaattaaattcaaaacaaaaaatatttctttaacaatatag 61
Query: 454 aagattttcattccaacacacgaaaacagattttgttttcacggaagatgtttgacaaag 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagattttcattccaacacacgaaaacagattttgttttcacggaagatgtttgacaaag 121
Query: 514 attttaccaaatatgcaacgacgacatatgatccaataaaaataggttcaatagacggta 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 attttaccaaatatgcaacgacgacatatgatccaataaaaataggttcaatagacggta 181
Query: 574 ctgacactgctcctcatgaccatgggattgtaagagcactgaactctgagtatgttccga 633
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 182 ctgacactgctcctcatgaccatgggattgtaagagcactgaactctgaatatgttccga 241
Query: 634 ataaaaaagttaaaggtgatcccaatcatactatatttgtcgccagactgaacccgagga 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataaaaaagttaaaggtgatcccaatcatactatatttgtcgccagactgaacccgagga 301
Query: 694 cgacagaggatacaatatattcagaattttcaaaatttggaaaagtgatcaactgcagac 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgacagaggatacaatatattcagaattttcaaaatttggaaaagtgatcaactgcagac 361
Query: 754 ttgtgaaggacatagtgactggaaaatcaaagcagtatgctttcgtagaatatgagaact 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgtgaaggacatagtgactggaaaatcaaagcagtatgctttcgtagaatatgagaact 421
Query: 814 tgtctagtttggatggagctttaaaggatatgaacaatgaatatttagatagttttgaga 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtctagtttggatggagctttaaaggatatgaacaatgaatatttagatagttttgaga 481
Query: 874 tcatagtggagcgggaagcagaaaggcgtctcagagggtggaggccgagacggctcgggg 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcatagtggagcgggaagcagaaaggcgtctcagagggtggaggccgagacggctcgggg 541
Query: 934 gaggattcgggggtcggaaggaatctgggcagctgagatttggatgcagagaaagaccct 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaggattcgggggtcggaaggaatctgggcagctgagatttggatgcagagaaagaccct 601
Query: 994 tcagaaaaccaatagtaattaatcctaaaaatgtcaaagtagaacctaaatagaatgtag 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcagaaaaccaatagtaattaatcctaaaaatgtcaaagtagaacctaaatagaatgtag 661
Query: 1054 tctatggtctggtcagttaaacttaggaatatatgtgataataataaaatatttgtataa 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctatggtctggtcagttaaacttaggaatatatgtgataataataaaatatttgtataa 721
Query: 1114 ctatctggtcatggcccgtcaaacgggatccgtcatgtcacgtagtctataatgagtgac 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctatctggtcatggcccgtcaaacgggatccgtcatgtcacgtagtctataatgagtgac 781
Query: 1174 gtgtgcaaagaattcaaaggctgg 1197
||||||||||||||||||||||||
Sbjct: 782 gtgtgcaaagaattcaaaggctgg 805
>BF14_178_C1
Length = 1396
Score = 123 bits (62), Expect = 9e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 agagatatatatatacaattgagaattatttaaaataataatagaacctaaagtataaat 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 agagatatatatatacaatggagaattatttaaaataataatagaacctaaagtataaat 1390
Query: 61 cttcgt 66
||||||
Sbjct: 1391 cttcgt 1396
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,344
Number of extensions: 4561
Number of successful extensions: 4561
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4561
Number of HSP's successfully gapped: 2
Length of query: 1546
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1529
Effective length of database: 8,119,229
Effective search space: 12414301141
Effective search space used: 12414301141
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)