BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09367 (UTR included)
(2440 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3252_C1 1588 0.0
>BF14_3252_C1
Length = 809
Score = 1588 bits (801), Expect = 0.0
Identities = 807/809 (99%)
Strand = Plus / Plus
Query: 377 atgtaacataaatggattttatatagtttatatttgatttctgttctttaatatttgttg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtaacataaatggattttatatagtttatatttgatttctgttctttaatatttgttg 60
Query: 437 atgacagttcatcaaatatacgattttaaacatggtattgcacctataatttattctata 496
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 atgacagttcatcaaatatacgattttaaacatggtattgcacctatgatttattctata 120
Query: 497 agttatgtctagaatacggggaatagaagctaaagtccaaaaagaaatagaagaaaacct 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttatgtctagaatacggggaatagaagctaaagtccaaaaagaaatagaagaaaacct 180
Query: 557 ggagaacagaagaaataaatataaggaagtcattaaaaagaagaatgacatatgcactaa 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagaacagaagaaataaatataaggaagtcattaaaaagaagaatgacatatgcactaa 240
Query: 617 agtggatagcgaaaagttacaaattgtcgaattgttgtacaaactgccgaagttggataa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtggatagcgaaaagttacaaattgtcgaattgttgtacaaactgccgaagttggataa 300
Query: 677 gatattcgacgtgcaccgtaagataggagagggcacgttcagctcggtgtacctgggttc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatattcgacgtgcaccgtaagataggagagggcacgttcagctcggtgtacctgggttc 360
Query: 737 actgaaacaacatgcccagctgcctgacgaccagaagcgatggtttgcgatcaaacacct 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgaaacaacatgcccagctgcctgacgaccagaagcgatggtttgcgatcaaacacct 420
Query: 797 tgttccaaccgcacaccctgcccgtatagaacatgaactaagatgcctccaagatatagg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttccaaccgcacaccctgcccgtatagaacatgaactaagatgcctccaagatatagg 480
Query: 857 gggcaaggattacgtgattggtgtagatctgtgccttagacatctggatactatagtttt 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggcaaggattacgtgattggtgtagatctgtgccttagacatctggatactatagtttt 540
Query: 917 tgtaatgccatatatacctcatagaaaattttctgaatatgtgggggatatggatgccga 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtaatgccatatatacctcatagaaaattttctgaatatgtgggggatatggatgccga 600
Query: 977 ggaggtccgatgttatatgagggccctcctggtggcgttgcgccatgtgcactcttttgg 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggaggtccgatgttatatgagggccctcctggtggcgttgcgccatgtgcactcttttgg 660
Query: 1037 agtcatacacagagatgtcaaacctagcaacttcctctatgacagggagaacagaaggta 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtcatacacagagatgtcaaacctagcaacttcctctatgacagggagaacagaaggta 720
Query: 1097 cttactggttgattttggtctagcgcagcgtgtggtgtccgacgggccctcgccacccgt 1156
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttactggttgattttggtctggcgcagcgtgtggtgtccgacgggccctcgccacccgt 780
Query: 1157 ccctcctccagcacacgccaacagtctca 1185
|||||||||||||||||||||||||||||
Sbjct: 781 ccctcctccagcacacgccaacagtctca 809
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,677
Number of extensions: 5943
Number of successful extensions: 5943
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5941
Number of HSP's successfully gapped: 1
Length of query: 2440
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2423
Effective length of database: 8,119,229
Effective search space: 19672891867
Effective search space used: 19672891867
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)