BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09382 (UTR included)
(2218 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1067_C1 1669 0.0
>BF14_1067_C1
Length = 855
Score = 1669 bits (842), Expect = 0.0
Identities = 851/854 (99%)
Strand = Plus / Plus
Query: 400 accgtacctttaccgttataaaaattataaaatcatcagttattagttgtttctacaaaa 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 accgtacctttaccgttataaaaattataaaatcatcagttattagttgtttctacaaaa 61
Query: 460 atattggacattttattttcttgttttaattacacggaataatgagtttagttgcgaata 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atattggacattttattttcttgttttaattacacggaataatgagtttagttgcgaata 121
Query: 520 cagggaagttggctggtcgtaccctattcataacgggagcatcccgtggtattggtaaag 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagggaagttggctggtcgtaccctattcataacgggagcatcccgtggtattggtaaag 181
Query: 580 ctatcgcactcaaagcggccaaagatggagctaacgttgttgttgccgctaaaaccgcag 639
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctatagcactcaaagcagccaaagatggagctaacgttgttgttgccgctaaaaccgcag 241
Query: 640 aacctcatcccaaattaccgggaactatttacacggccgcagaagagattgaggctcttg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacctcatcccaaattaccgggaactatttacacggccgcagaagagattgaggctcttg 301
Query: 700 gtggaaaagctttgccttgcattgttgatgtgagagatgagaaacagattcagaaagcca 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtggaaaagctttgccttgcattgttgatgtgagagatgagaaacagattcagaaagcca 361
Query: 760 tcgatgaagctgttaaaaagttcaatggcattgatatactcataaacaatgcttcggcca 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcgatgaagctgttaaaaagttcaatggcattgatatactcataaacaatgcttcggcca 421
Query: 820 tatcactcactgggactgcggagaccgatatgaagagatacgacctcatgcacaatatta 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tatcactcactgggactgcggagaccgatatgaagagatacgacctcatgcacaatatta 481
Query: 880 acaccaggggcacatttttggcatcaaaactatgcctgccgttgttgaaagaaagcaacc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acaccaggggcacatttttggcatcaaaactatgcctgccgttgttgaaagaaagcaacc 541
Query: 940 acgctcacatcctaaacctgtcgccaccacttaacatgaatccttattggttttcactgc 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acgctcacatcctaaacctgtcgccaccacttaacatgaatccttattggttttcactgc 601
Query: 1000 acgttgcttacacaatggctaaatatgggatgtctatgtgtgtgctggggatgagtgaag 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acgttgcttacacaatggctaaatatgggatgtctatgtgtgtgctggggatgagtgaag 661
Query: 1060 aatttagacaattcaatattggggttaatgcactttggccaaaaactgctatcgcgacag 1119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aatttagacaattcaatatcggggttaatgcactttggccaaaaactgctatcgcgacag 721
Query: 1120 ccgccattgaaatgttgactggcgacacttcgtccagtcgcaaaccggaaatagtctcag 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ccgccattgaaatgttgactggcgacacttcgtccagtcgcaaaccggaaatagtctcag 781
Query: 1180 atgctgcctacgtcatgttgagcaaagaccctaaatcatacacgggcaagtttgagatag 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atgctgcctacgtcatgttgagcaaagaccctaaatcatacacgggcaagtttgagatag 841
Query: 1240 atgaagatgtagtt 1253
||||||||||||||
Sbjct: 842 atgaagatgtagtt 855
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,849
Number of extensions: 6831
Number of successful extensions: 6831
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6831
Number of HSP's successfully gapped: 1
Length of query: 2218
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2201
Effective length of database: 8,119,229
Effective search space: 17870423029
Effective search space used: 17870423029
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)