BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09413 (UTR included)
(3604 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2B06 1602 0.0
BF14_378_C1 938 0.0
>BF01054B2B06
Length = 816
Score = 1602 bits (808), Expect = 0.0
Identities = 814/816 (99%)
Strand = Plus / Plus
Query: 2162 cacatccacctcagcagtggctgaactaaagtttgacgtggtcaacatgtccgctgttga 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacatccacctcagcagtggctgaactaaagtttgacgtggtcaacatgtccgctgttga 60
Query: 2222 tgacttcagatccttcggttttgaggcatctgttgagttcgtaaggctgagcagtgtttg 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacttcagatccttcggttttgaggcatctgttgagttcgtaaggctgagcagtgtttg 120
Query: 2282 tgattccacccaccgagtgtttggagctagtggggaattgaggctttcatactatcctcc 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgattccacccaccgagtgtttggagctagtggggaattgaggctttcatactatcctcc 180
Query: 2342 aatgtctgaagatgatcgttgtgactttcgtccctggttgattgatccagcaccaggcag 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgtctgaagatgatcgttgtgactttcgtccctggttgattgatccagcaccaggcag 240
Query: 2402 gtacctttatctccaaatccaaggcagcttgattaaggaaccggaactcgataacttcac 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtacctttatctccaaatccaaggcagcttgattaaggaaccggaactcgataacttcac 300
Query: 2462 gttacaaaataatataacagttgctccggatttgaggcatttatgccaaacacagaatcg 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttacaaaataatataacagttgctccggatttgaggcatttatgccaaacacagaatcg 360
Query: 2522 tattgcagtctacgctggaggactttctccgatattcatatgtcctaggccaccagtaga 2581
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattgcagtttacgctggaggactttctccgatattcatatgtcctaggccaccagtaga 420
Query: 2582 acaggaagacgacgtagtggaagtattctccgaaggttggacttcggaagtggatggttt 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaggaagacgacgtagtggaagtattctccgaaggttggacttcggaagtggatggttt 480
Query: 2642 gtccagacacgtgctggcggcgacgccctccctcgaccggttcgatttggaatggccacg 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtccagacacgtgctggcggcgacgccctccctcgaccggttcgatttggaatggccacg 540
Query: 2702 atcgctctctgttgaactgatagccgtggagactggctcctattacattacgtggttgga 2761
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 atcgctctctgttgaactgatagcggtggagactggctcctattacattacgtggttgga 600
Query: 2762 actatcgaggagacacccaagtcctcgcggcggtgtcttcgctctctccggcgagtgtac 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actatcgaggagacacccaagtcctcgcggcggtgtcttcgctctctccggcgagtgtac 660
Query: 2822 tcataaatgttcgtctttggacgcgtgcatcgaaccagctctttggtgtgacggagtgcc 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcataaatgttcgtctttggacgcgtgcatcgaaccagctctttggtgtgacggagtgcc 720
Query: 2882 gcagtgtccgcacggggaggacgagcgtctgtcgcaatgctctgctctcatgagactgcc 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcagtgtccgcacggggaggacgagcgtctgtcgcaatgctctgctctcatgagactgcc 780
Query: 2942 cgcgcattacgcagccgctctgctcgcgctcacagt 2977
||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgcgcattacgcagccgctctgctcgcgctcacagt 816
>BF14_378_C1
Length = 1203
Score = 938 bits (473), Expect = 0.0
Identities = 514/527 (97%), Gaps = 5/527 (0%)
Strand = Plus / Plus
Query: 3078 ttcgacgagaaagaagtgatttgctgaccaagcgaggactctgtgcggtacgtggaagta 3137
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ttcgacgagaaagaagtgatttgctgacccnnn-aggactctgtgcggtacgtggaagta 59
Query: 3138 gaccgcgtcaccaccgtgtgatcgtctcccgcacagagtctcatactaatgttcatacac 3197
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaccgcgtcaccaccgtgtgaccgtctcccgcacagagtctcatactaatgttcatacat 119
Query: 3198 tcgccacctcttggcgcatcggtgagaatccgtttatttctatacggttgatatttaatt 3257
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgccacctcttggcgcatcggtgagaatccgtttatttctatacggttgatatttaatt 179
Query: 3258 ctcttctattattcctcactataagttaatacttaattgattatgtatggaccaaacgca 3317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctcttctattattcctcactataagttaatacttaattgattatgtatggaccaaacgca 239
Query: 3318 gtcgaacggtcaccgtgtccatgtattaagtggtctttatcaaacccatcgtatttcctt 3377
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 240 gtcgaacggtcaccgtgtccatgtattaagtggtctttatcaatcccatcgtatttcctt 299
Query: 3378 tgtatctgtatatatgaacgcacaatttttcgaccgatcgacttgtggcacaacgttcat 3437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgtatctgtatatatgaacgcacaatttttcgaccgatcgacttgtggcacaacgttcat 359
Query: 3438 ttgttctgttactcgattgtgatttttaatgtaatgtaaatagagtagtatttattgtgt 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttgttctgttactcgattgtgatttttaatgtaatgtaaatagagtagtatttattgtgt 419
Query: 3498 aacgttcgtcatagtatagaccgtacgttgtggcaataattctgttaatgtttcccaagt 3557
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 420 aacgttcgtcatagtatagac----cgttgtggcaataattctgttaatgtttcccaagt 475
Query: 3558 cgtctgtgttctctcaattctatatgtatacgtgatagaaaactgcc 3604
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cgtctgtgttctctcaattctatatgtatacgtgatagaaaactgcc 522
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,458
Number of extensions: 5130
Number of successful extensions: 5130
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5129
Number of HSP's successfully gapped: 2
Length of query: 3604
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3586
Effective length of database: 8,109,745
Effective search space: 29081545570
Effective search space used: 29081545570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)