BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09415 (UTR included)
(2431 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2F03 1245 0.0
BF01030A2H01 957 0.0
BF01029B1G10 357 5e-98
BF01041B1A11 198 3e-50
>BF01032A2F03
Length = 664
Score = 1245 bits (628), Expect = 0.0
Identities = 648/655 (98%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 1557 gcggtgctgtgttcgcgctcgttcccgcagctggccgccattttccaggagtaccagttc 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcggtgctgtgttcgcgctcgttcccgcagctggccgccattttccaggagtaccagttc 72
Query: 1617 ctgacggggcatgacatcgatgacgctatcaaagccgaattctccggggacctcgagaag 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ctgacggggcatgacatcgatgacgctatcaaagccgaattctccggggacctcgagaag 132
Query: 1677 gctctgagagctatcgtgaaagttgtccgcaacaaaccgctgttcttcgcggagaggttg 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gctctgagagctatcgtgaaagttgtccgcaacaaaccgctgttcttcgcggagaggttg 192
Query: 1737 cacaagtctatgaagggtttgggcaccaacgaccgtcagctcatccgcatcatggtgacc 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cacaagtctatgaagggtttgggcaccaacgaccgtcagctcatccgcatcatggtgacc 252
Query: 1797 cgctgtgaggtggaccttggagacatcgcggatatgttccagtccaagtacggagagacc 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cgctgtgaggtggaccttggagacatcgcggatatgttccagtccaagtacggagagacc 312
Query: 1857 ctgcagagctggatcgagggcgattgttccgggcactacaagaaatgtctgctgggtcta 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgcagagctggatcgagggcgattgttccgggcactacaagaaatgtctgctgggtcta 372
Query: 1917 ctcggtctttactagacacaagaaccgtatcgtttttgtctatctcgtttttaagtctta 1976
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 373 ctcggtctttactagacacaagaaccgtatcgtctttgtctatctcgtttttaagtctta 432
Query: 1977 gcttgttcattttgtatgtgtagcaaggccaaccgaacgagataaatattgtaaacagtg 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttgttcattttgtatgtgtagcaaggccaaccgaacgagataaatattgtaaacagtg 492
Query: 2037 ttgactatgaaaagcatataatttatttgctaccacatatgatatgtggtttttatatag 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttgactatgaaaagcatataatttatttgctaccacatatgatatgtggtttttatatag 552
Query: 2097 gtatacatactatacaatacaaacatgtttagacttgagaataataataataataataat 2156
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 553 gtatacatactatacaatacaaacatgtttagacttgag---aataataataataataat 609
Query: 2157 ataatgagtattttcaactcttgaaatttatatatacatattttaatcgtttctt 2211
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 610 ataatgagtattttcaactcttnnnatttatatatacatattttaatcgtttctt 664
>BF01030A2H01
Length = 665
Score = 957 bits (483), Expect = 0.0
Identities = 492/495 (99%)
Strand = Plus / Plus
Query: 983 gtctaagccaactgtggtaccagtaaacccattcgatccgagggacgatgctgccgttct 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gtctaagccaactgtggtaccagtaaacccattcgatccgagggacgatgctgccgttct 230
Query: 1043 tcggaaggcaatgaaaggttttgggactgatgaaaaagctatcattcaagtcctaacacg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcggaaggcaatgaaaggttttgggactgatgaaaaagctatcattcaagtcctaacacg 290
Query: 1103 tagaagcaatgaacagcgtctgcgtatcgcgttcgagtttaagaccttgtatggaaagga 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tagaagcaatgaacagcgtctgcgtatcgcgttcgagtttaagaccttgtatggaaagga 350
Query: 1163 tttggtgtcagacttaaagagtgagacgactggcaagtttgaggatatcgtcgtagctct 1222
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 351 tttggtgtcagacttaaagagtgagacaagtggcaagtttgaggatatcgtcgtagctct 410
Query: 1223 catgacgccgttgcctcagttttacgccaaggaactgcacgatgctaccgctgggattgg 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 catgacgccgttgcctcagttttacgccaaggaactgcacgatgctaccgctgggattgg 470
Query: 1283 cactgatgaagatgtgctcatagaagtgatgtgcactatgtccaatcacgagataaacgt 1342
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 471 cactgatgaagatgtgctcatagaagtcatgtgcactatgtccaatcacgagataaacgt 530
Query: 1343 catcaaacaggcttacacagcaatatacggaaccctcttagaagatgacctacgcggcga 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 catcaaacaggcttacacagcaatatacggaaccctcttagaagatgacctacgcggcga 590
Query: 1403 cacttccggtaacttcaagagactcatgacgtcactgtgcatgggtaacagatccgaaaa 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cacttccggtaacttcaagagactcatgacgtcactgtgcatgggtaacagatccgaaaa 650
Query: 1463 tttccacgtcgatca 1477
|||||||||||||||
Sbjct: 651 tttccacgtcgatca 665
>BF01029B1G10
Length = 752
Score = 357 bits (180), Expect = 5e-98
Identities = 183/184 (99%)
Strand = Plus / Plus
Query: 1692 gtgaaagttgtccgcaacaaaccgctgttcttcgcggagaggttgcacaagtctatgaag 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gtgaaagttgtccgcaacaaaccgctgttcttcgcggagaggttgcacaagtctatgaag 279
Query: 1752 ggtttgggcaccaacgaccgtcagctcatccgcatcatggtgacccgctgtgaggtggac 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 ggtttgggcaccaacgaccgtcagctcatccgcatcatggtgacccgctgtgaagtggac 339
Query: 1812 cttggagacatcgcggatatgttccagtccaagtacggagagaccctgcagagctggatc 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cttggagacatcgcggatatgttccagtccaagtacggagagaccctgcagagctggatc 399
Query: 1872 gagg 1875
||||
Sbjct: 400 gagg 403
>BF01041B1A11
Length = 735
Score = 198 bits (100), Expect = 3e-50
Identities = 103/104 (99%)
Strand = Plus / Plus
Query: 2328 taaaattattttcattttatataaaaaaatatatatatttaccattctcattcgacttaa 2387
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 taaaattattttcattttatataaaaatatatatatatttaccattctcattcgacttaa 60
Query: 2388 ttcgttttatatatgatatattaattattaatggttctgcctat 2431
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgttttatatatgatatattaattattaatggttctgcctat 104
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,422
Number of extensions: 8225
Number of successful extensions: 8225
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8219
Number of HSP's successfully gapped: 4
Length of query: 2431
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2414
Effective length of database: 8,119,229
Effective search space: 19599818806
Effective search space used: 19599818806
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)