BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09431 (UTR included)
(1694 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_476_C1 1576 0.0
>BF14_476_C1
Length = 823
Score = 1576 bits (795), Expect = 0.0
Identities = 816/823 (99%)
Strand = Plus / Plus
Query: 354 atcaagcgctatcaaatcattgccagctgagaaaagcttttatgaatactttgaaaaatg 413
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 atcaagcgctatcaaatcattgccagctgagaaaagcttctatgaatactttgaaaaatg 60
Query: 414 tcaaactctcggggagcagttaagtgaaattgagactgacaatcaagaaacagaaacaac 473
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaactctcgaggagcagttaagtgaaattgagactgacaatcaagaaacagaaacaac 120
Query: 474 aatgcaaccggcagaagatgatccctactcatcagaaaatcttgtacaggacaatatgaa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgcaaccggcagaagatgatccctactcatcagaaaatcttgtacaggacaatatgaa 180
Query: 534 gcatttctgtaatatattgcagtttgctaatgatgttagtccacaaataatgccaagtaa 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatttctgtaatatattgcagtttgctaatgatgttagtccacaaataatgccaagtaa 240
Query: 594 atccaacggtaaaataacacatttgcatggactgggatgtaaaactaacttcactatgta 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccaacggtaaaataacacatttgcatggactgggatgtaaaactaacttcactatgta 300
Query: 654 catgatagccgttgacagcattcggaattatcactttgctgaggctcttggtattgatat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catgatagccgttgacagcattcggaattatcactttgctgaggctcttggtattgatat 360
Query: 714 taaaaataaaaaggacatgacagctgctgtcattttggacagtaagcaagagagccagta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaaaataaaaaggacatgacagctgctgtcattttggacagtaagcaagagagccagta 420
Query: 774 tgttctgtctgaagattacagcgcaaagtcaatacgtgatttcatatataatttcaccca 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttctgtctgaagattacagcgcaaagtcaatacgtgatttcatatataatttcaccca 480
Query: 834 aaagaaacttaagcgaactctccgtacacacgtgggagacgctaagaacactcactactt 893
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 aaagaaacttaagcgaactctccgtacacacgtgggagacgctaagaatactcactactt 540
Query: 894 cggtgcctatggagatactgaacccgatggaggagaagataaggcagtacatattataga 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggtgcctatggagatactgaacccgatggaggagaagataaggcagtacatattataga 600
Query: 954 tttaactacacatacatttaggaaagtcgttaggactcccggagtgttgacaatattatc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttaactacacatacatttaggaaagtcgttaggactcccggagtgttgacaatattatc 660
Query: 1014 tgtatgcggcggtgcgtgcagtgcgcatacgtcgcgagccgtatcttgcgcgtcccgtgc 1073
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 tgtatgcggcggtgcgtgcagtgcgcatacgtcgcgagcggtatcttgcgcgtcccgtgc 720
Query: 1074 gttgtcagctgcgggggcgagtgtacaggtggcgcgcatcgacgccttgagacatgacct 1133
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 gttgtcagctgcgggggcgagtgtacaggtggcgcgcattgacgccttgagacatgacct 780
Query: 1134 tcccgcgcattacacgccgcatagatacccagcgctgttcgtc 1176
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 781 acccgcgcattacacgccgcatagatacccagcgttgttcgtc 823
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,483
Number of extensions: 4054
Number of successful extensions: 4054
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4054
Number of HSP's successfully gapped: 1
Length of query: 1694
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1677
Effective length of database: 8,119,229
Effective search space: 13615947033
Effective search space used: 13615947033
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)