BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09465 (UTR included)
(1887 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_761_C1 1209 0.0
BF01017B1A10 88 6e-17
>BF14_761_C1
Length = 878
Score = 1209 bits (610), Expect = 0.0
Identities = 610/610 (100%)
Strand = Plus / Plus
Query: 1278 agggacagctgcaggacggagagccagagctcgctgtactccatgaacatcagaaacgac 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agggacagctgcaggacggagagccagagctcgctgtactccatgaacatcagaaacgac 61
Query: 1338 aacagatccaacgacccgctggtgtacgactgcgactccgagaggtccagctacgagagg 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aacagatccaacgacccgctggtgtacgactgcgactccgagaggtccagctacgagagg 121
Query: 1398 aagaagatcataaagaacatagagaggaacacggacagaagaaacgagaactacttctac 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagaagatcataaagaacatagagaggaacacggacagaagaaacgagaactacttctac 181
Query: 1458 gacgacgccatcttgcatttcgacgacgagtacgccttcgacggctccataatattcgcc 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgacgccatcttgcatttcgacgacgagtacgccttcgacggctccataatattcgcc 241
Query: 1518 aaacgcagaaaatccgtggaccgcaacatagacttgacgtgcgagctccccagcgccgtg 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaacgcagaaaatccgtggaccgcaacatagacttgacgtgcgagctccccagcgccgtg 301
Query: 1578 tacgaccagctctccaacgacagctacggctactacctgcccgacgacgaggacgaggac 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tacgaccagctctccaacgacagctacggctactacctgcccgacgacgaggacgaggac 361
Query: 1638 ctgtacttcgtcaacgacaccctcaccttcaacctgccgccgcatcgtgccagcatctaa 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctgtacttcgtcaacgacaccctcaccttcaacctgccgccgcatcgtgccagcatctaa 421
Query: 1698 ttatacaacctagtttaaaacaagggccaattagtgtaaattatagattttacacagttc 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttatacaacctagtttaaaacaagggccaattagtgtaaattatagattttacacagttc 481
Query: 1758 acgcttgtattggcttatgtagatattgtaaattcgctaagctaaaaattcctttttttt 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acgcttgtattggcttatgtagatattgtaaattcgctaagctaaaaattcctttttttt 541
Query: 1818 ggaccctatatattttttttctcccatcacagaactcaaatgtcaacaaacgtaatcgtc 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggaccctatatattttttttctcccatcacagaactcaaatgtcaacaaacgtaatcgtc 601
Query: 1878 gataacgttt 1887
||||||||||
Sbjct: 602 gataacgttt 611
>BF01017B1A10
Length = 716
Score = 87.7 bits (44), Expect = 6e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 877 ctcttcggaggtccgggtcgcttgatggctggtctccgctctgtctgccgttggacgctt 936
||||||||||||| |||||||||||||| ||| ||| ||||||||||||| || |||||
Sbjct: 436 ctcttcggaggtctgggtcgcttgatggtcggtttccactctgtctgccgtcgggcgctt 495
Query: 937 gcgctcggcggtgggt 952
||||||||| ||||||
Sbjct: 496 gcgctcggcagtgggt 511
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 211,077
Number of extensions: 8333
Number of successful extensions: 8333
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8333
Number of HSP's successfully gapped: 2
Length of query: 1887
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1870
Effective length of database: 8,119,229
Effective search space: 15182958230
Effective search space used: 15182958230
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)