BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09470 (UTR included)
(1792 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2563_C1 1055 0.0
>BF14_2563_C1
Length = 1391
Score = 1055 bits (532), Expect = 0.0
Identities = 553/560 (98%)
Strand = Plus / Plus
Query: 1050 ggtaacaaatcggatagcggcctggagcgggcggtgaggcgggaggagggtcagcgtctc 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggtaacaaatcggatagcggcctggagcgggcggtgaggcgggaggagggtcagcgtctc 891
Query: 1110 gcgagggaatatcaagtagcgtttatggagacatccgccaaaacgggtctcaacgtggaa 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gcgagggaatatcaagtagcgtttatggagacatccgccaaaacgggtctcaacgtggaa 951
Query: 1170 gcggcgttctcgcacgtggcgcgatctcttgtagctaaagcgaaccctgtagacacatcg 1229
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gcggcgttctcgcacgtggcgcgatctcttgtagctaaagcgaaccctgtagacacatcc 1011
Query: 1230 cgattggcggtgcgcgcgcagactactcaagaacatcgctcgacctgtccgcaatgcact 1289
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 cgcttggcggtgcgcgcgcagactactcaagaacatcgctcgacctgtccgcaatgcact 1071
Query: 1290 taaattgacgttgacagttgacagatgacagatgacagatgacatttgacggttgatgtt 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 taaattgacgttgacagttgacagatgacagatgacagatgacatttgacggttgatgtt 1131
Query: 1350 tttaaattaagacgtcaatttgacgtgtatatacattgaatattaaatatatgtaaatgc 1409
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 tttaaattaagacgtcagttcgacgtgtatatacattgaatattaaatatatgtaaatgc 1191
Query: 1410 taatgaatgtattgctgcaagcgtttgtaataatgatttaaataaaatatgaattatatt 1469
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 taataaatgtattgctgcaagcgtttgtaataatgatttaaataaaatatgaattatatt 1251
Query: 1470 aattgtgttatatttagaggattaatgacaatctcattatttcaatgtaacagttagata 1529
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 gattgtgttatatttagaagattaatgacaatctcattatttcaatgtaacagttagata 1311
Query: 1530 cagctcgaaacaagacaagtgtatatttatcagctttttatacatatacatacgcttttg 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 cagctcgaaacaagacaagtgtatatttatcagctttttatacatatacatacgcttttg 1371
Query: 1590 tatgttggtaataatatgac 1609
||||||||||||||||||||
Sbjct: 1372 tatgttggtaataatatgac 1391
Score = 440 bits (222), Expect = e-123
Identities = 225/226 (99%)
Strand = Plus / Plus
Query: 830 gaataaggtagtaacagtggacggaatcaaagttaaacttcagatctgggacacggcagg 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaataaggtagtaacagtggacggaatcaaagttaaacttcagatctgggacacggcagg 556
Query: 890 tcaagagcgcttccgcagcgtcacacacgcttattacagagacgcacatgctcttctcct 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcaagagcgcttccgcagcgtcacacacgcttattacagagacgcacatgctcttctcct 616
Query: 950 gctatacgacgtcacaaacaaaaccagcttcgacaacatacgagcctggctcggtgagat 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gctatacgacgtcacaaacaaaaccagcttcgacaacatacgagcctggctcggtgagat 676
Query: 1010 ccgagagtacgctcaggacgacgtcgtcatcatgttgttgggtaac 1055
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 677 ccgagagtacgcgcaggacgacgtcgtcatcatgttgttgggtaac 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,721
Number of extensions: 6333
Number of successful extensions: 6333
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6329
Number of HSP's successfully gapped: 2
Length of query: 1792
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1775
Effective length of database: 8,119,229
Effective search space: 14411631475
Effective search space used: 14411631475
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)