BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09490 (UTR included)
(2689 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_406_C1 1707 0.0
BF01029A1A02 412 e-114
>BF14_406_C1
Length = 920
Score = 1707 bits (861), Expect = 0.0
Identities = 879/884 (99%), Gaps = 1/884 (0%)
Strand = Plus / Plus
Query: 1807 ctacatcaaatataaacacactaatacgagacatattccgtacaccccccagcttcaaga 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctacatcaaatataaacacactaatacgagacatattccgtacaccccccagcttcaaga 60
Query: 1867 gcaaagttcaactttcatttcaaacaaagaaagctgaaaaagaggaaaatcagccagctg 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaagttcaactttcatttcaaacaaagaaagctgaaaaagaggaaaatcagccagctg 120
Query: 1927 taatacatgagagggaaaaagaatcgtcgtctaaacggcacagaccaataacatttgata 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatacatgagagggaaaaagaatcgtcgtctaaacggcacagaccaataacatttgata 180
Query: 1987 atggcgaaaaaaaggaatctccggagaaaaggtcgagaagtggtgatgggaacgtcaaaa 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggcgaaaaaaaggaatctccggagaaaaggtcgagaagtggtgatgggaacgtcaaaa 240
Query: 2047 tgtacacaccaccatctggcaaatacagctccagacttagcaactccggacgattcactg 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtacacaccaccatctggcaaatacagctccagacttagcaactccggacgattcactg 300
Query: 2107 gttcaaacccgagcagggggaggggatatggcaggcgtgattttaggaacaatgcgcctt 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttcaaacccgagcagggggaggggatatggcaggcgtgattttaggaacaatgcgcctt 360
Query: 2167 atagacgacgcaataactattaataaaa-aaatatactataacattggggttaggataaa 2225
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 atagacgacgcaataactattaataaaaaaaatatactataacattggggttaggataaa 420
Query: 2226 accgtgggcgtcaacaattccaagcgttgatttacaaacgcacaaattctaaaaatatga 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgtgggcgtcaacaattccaagcgttgatttacaaacgcacaaattctaaaaatatga 480
Query: 2286 cttgcagaaaaaaatatgatactaacactatagattttgaaggggaaaatatattttaat 2345
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 cttgcagaaagaaatatgatactaacactatagattttgaaggggaaaatataaattaat 540
Query: 2346 ttcgtttcgcatttggacattgactggttggattttctagaagcatctttacattctgtg 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcgtttcgcatttggacattgactggttggattttctagaagcatctttacattctgtg 600
Query: 2406 gacgcggtcgtagttatttacaggatttttcggcgtgctggtagctgattaaggcaaagt 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacgcggtcgtagttatttacaggatttttcggcgtgctggtagctgattaaggcaaagt 660
Query: 2466 ttgtagtatttcaatattttttagtctaggataccgccaccggtgtcaacgtattggtaa 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgtagtatttcaatattttttagtctaggataccgccaccggtgtcaacgtattggtaa 720
Query: 2526 gttatatacacattgaatattatttacaatacgctaataaaaggagagatgctgacaaaa 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttatatacacattgaatattatttacaatacgctaataaaaggagagatgctgacaaaa 780
Query: 2586 tatattgttcacgacattgtaagtattttaattttattatagcaattattcgtacctgac 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatattgttcacgacattgtaagtattttaattttattatagcaattattcgtacctgac 840
Query: 2646 tctcgacgtctatccaatacggagcatgtattatattttcaaca 2689
||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 841 tctcgacgtctatccaatacggagcatgtattatattntcaaca 884
>BF01029A1A02
Length = 250
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Minus
Query: 1182 ttggcattagcattcacaccaggcgactggcatccggaggatcctgaatatatagacaga 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttggcattagcattcacaccaggcgactggcatccggaggatcctgaatatatagacaga 184
Query: 1242 ctcatccagtgcacccaacatgcattgcctttatttacagcgcaagtagattccactcag 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcatccagtgcacccaacatgcattgcctttatttacagcgcaagtagattccactcag 124
Query: 1302 tatgtcaatatcttttgtgataatgtacttgcacagtggaatgatttagctacaactggc 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tatgtcaatatcttttgtgataatgtacttgcacagtggaatgatttagctacaactggc 64
Query: 1362 agtgcagatataaaattggagatattaa 1389
||||||||||||||||||||||||||||
Sbjct: 63 agtgcagatataaaattggagatattaa 36
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1412 gcactgcggagagcttgagaatgcaccacaaaaaattaatat 1453
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcactgcggagagcttgagaatgcaccacaaaaaattaatat 42
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 396,121
Number of extensions: 9250
Number of successful extensions: 9250
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9249
Number of HSP's successfully gapped: 3
Length of query: 2689
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2672
Effective length of database: 8,119,229
Effective search space: 21694579888
Effective search space used: 21694579888
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)