BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09502 (UTR included)
(1915 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2H06 1489 0.0
>BF01010A2H06
Length = 767
Score = 1489 bits (751), Expect = 0.0
Identities = 763/767 (99%)
Strand = Plus / Plus
Query: 230 tgcggtgagaccgtcggcgaacgtctgtttataaagcttgtataagttgtgattaatgta 289
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcggtgagaccgtcggcggatgtctgtttataaagcttgtataagttgtgattaatgta 60
Query: 290 tatgagtatttaatagtaattgaatataatttcatggattgatagatattatagaacgaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 tatgagtatttaatagtaattgaatataatttcatggattgatagatattatagatcgaa 120
Query: 350 attttggtttataattttgtatgatttaaatgttcaagtgcagactcataataaataaga 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attttggtttataattttgtatgatttaaatgttcaagtgcagactcataataaataaga 180
Query: 410 gtgtagacattggttgctatatgtggtgctagtgcatttgtttatttttagacttcacat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtagacattggttgctatatgtggtgctagtgcatttgtttatttttagacttcacat 240
Query: 470 tttgcagtcatgtaattattctgaatctataatgtcgcaaagggataccgctatacatct 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgcagtcatgtaattattctgaatctataatgtcgcaaagggataccgctatacatct 300
Query: 530 tgttgctggcggaattgctggcaccgcaggggctgtagttacatgtcctctagaagtagt 589
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 tgttgctggcggaattgctggcaccgcaggggctgtagttacatgtcccctagaagtagt 360
Query: 590 gaagacgagactgcaatcttcgaagggagtaggcattcctccgacaccaccatctggagc 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagacgagactgcaatcttcgaagggagtaggcattcctccgacaccaccatctggagc 420
Query: 650 ttctaactccaaaagagtttgttctaagattcccaaacatcaggaggctaaatggggcta 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttctaactccaaaagagtttgttctaagattcccaaacatcaggaggctaaatggggcta 480
Query: 710 cagacgtacgatgggcgctatgttcgcctacagcagacaagccgatcgaatgctgatgtc 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagacgtacgatgggcgctatgttcgcctacagcagacaagccgatcgaatgctgatgtc 540
Query: 770 ctacaattgtcaggtgcagcagtacgcgagggcgggccacgccaggaccacatccaggat 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctacaattgtcaggtgcagcagtacgcgagggcgggccacgccaggaccacatccaggat 600
Query: 830 gaccctcatacagtgcctcagacatatcgtacagaatgaaggcgctcgggcgcttttcaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaccctcatacagtgcctcagacatatcgtacagaatgaaggcgctcgggcgcttttcaa 660
Query: 890 gggtctgggtccaaatatcgtaggcgtggcgccctctagagctatttacttctgcactta 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gggtctgggtccaaatatcgtaggcgtggcgccctctagagctatttacttctgcactta 720
Query: 950 ttcgcaagcgaaagccatcttcaatcagcacctgccgccggacactc 996
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcgcaagcgaaagccatcttcaatcagcacctgccgccggacactc 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,115
Number of extensions: 10375
Number of successful extensions: 10375
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10375
Number of HSP's successfully gapped: 1
Length of query: 1915
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1898
Effective length of database: 8,119,229
Effective search space: 15410296642
Effective search space used: 15410296642
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)