BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09506 (UTR included)
(3370 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3397_C1 1721 0.0
BF01052B2H04 204 7e-52
BF01062B1G09 170 9e-42
BF01056B1D02 133 2e-30
BF01052B1H02 109 3e-23
BF01031B1E12 103 2e-21
BF01023A2A12 80 3e-14
BF01040A1G09 76 4e-13
>BF14_3397_C1
Length = 944
Score = 1721 bits (868), Expect = 0.0
Identities = 925/944 (97%)
Strand = Plus / Plus
Query: 194 caaattccaagaacttaaactgtgtattttcgttcatttgtacttgatagtattcccttt 253
||||||| || |||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1 caaattctaataacttaaactgtgtattttcgttcatttgtacttcatagtatttccttt 60
Query: 254 agattaacaatcgcaataacttctttgttgtttgtttgatatacactttgtaagaattaa 313
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agattaacaatcgaaataacttctttgttgtttgtttgatatacactttgtaagaattaa 120
Query: 314 atgatcatacgataaattttttaataatttgcttattttcaacgagtagatgggattgtt 373
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 atgatcatacgataatttttttaataatctgcttattttcaacgagtagatgggattgtt 180
Query: 374 tactatttgtagtcattgtttagtgtgtcattcttaaaattatcatcgtgttaatcttta 433
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 tactatttgtagtcattgtttagtgtgtcattcttaaaattatcaccgtgttaatcttta 240
Query: 434 attaaataacgacatcttagaagactaaaatatttaataaaagtgcttaataaacaataa 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attaaataacgacatcttagaagactaaaatatttaataaaagtgcttaataaacaataa 300
Query: 494 ataaatcatgtataaaaaaccaacgtccgggaaaaagacaaacttgtctcagtttggtct 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 ataaatcatgtataaaaaaccaacgtccgggaaaaagacaaacttgtctcagtttggcct 360
Query: 554 gatagacatcccagatttggatgacgaagaagcaatggatctgtctgatgatgatgtgga 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatagacatcccagatttggatgacgaagaagcaatggatctgtctgatgatgatgtgga 420
Query: 614 tttagaagcagaactggcagcacttagcggaggaaagaagcaacaaagacaacgcaaacc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttagaagcagaactggcagcacttagcggaggaaagaagcaacaaagacaacgcaaacc 480
Query: 674 agctcctgtaccagccagtgaccttgacgctatgatcgctgcgagcttgaaagatatacc 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctcctgtaccagccagtgaccttgacgctatgatcgctgcgagcttgaaagatatacc 540
Query: 734 ttcagatgaagacgtgtcaggtgatgaggatgatccagatcttctagacgagcttcaagc 793
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 ttcagatgaagatgtgtcaggtgatgaggatgatccggatcttctagacgagcttcaagc 600
Query: 794 cctagcgatagatgaccagcctcaattagaacctccacgaccgaggacaagtcgaccggc 853
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 601 cctagcgatagatgaccagcctcaattagaacctccacgatcaaggacaagtcgaccggc 660
Query: 854 accacctccaccgtccgctgagaatagtattgtcagccttctacaagaaagaatctccaa 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accacctccaccgtccgctgagaatagtattgtcagccttctacaagaaagaatctccaa 720
Query: 914 ttacgctatcgctgagaagaatgctaaggaaagcggggaaagtggaagagctagacggtt 973
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttatgctatcgctgagaagaatgctaaggaaagcggggaaagtggaagagctagacggtt 780
Query: 974 tggtagagcccttaagacactcaacgacctactgaagcaagctaaatctggaaaatcaat 1033
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggtagagccctcaagacactcaacgacctactgaagcaagctaaatctggaaaatcaat 840
Query: 1034 aaacaatgaggacattcctccaccagttagtgtggggaaacctaaatcggatgtaccaag 1093
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 841 aaacgatgaggacattcctccaccagttagtgtggggaaacctaaaccggatgtacccag 900
Query: 1094 agagatgccatcgaatgacccacagccagaacccactaacacac 1137
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 901 agagatgccatcgaatgacccacaaccagaacccactaacacac 944
>BF01052B2H04
Length = 668
Score = 204 bits (103), Expect = 7e-52
Identities = 112/114 (98%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 3255 aagacgtgatccatttatatcattaaaacataataatttaagccataataataatcttca 3314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aagacgtgatccatttatatcattaaaacataataatttaagccataataataatcttca 609
Query: 3315 ttgttgtcatgtaaataactttatatat--atatttatattttacggtatatat 3366
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 608 ttgttgtcatgtaaataactttatatatatatatttatattttacggtatatat 555
>BF01062B1G09
Length = 398
Score = 170 bits (86), Expect = 9e-42
Identities = 186/218 (85%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 2818 ttcaacagcagtttgagcacaccacagtccgatggctcatcatagacccatagactacaa 2877
|||||||||||||||| ||| || | ||| || || || |||| ||||||| || |||||
Sbjct: 386 ttcaacagcagtttgaacacccccccgtcggagggttcttcatggacccatggattacaa 327
Query: 2878 catgcttgataaataacaaaaagtagtaggaaaggttaaagtctcttagacgattgggtt 2937
|||||||||||| | ||||||||||| ||||||||| ||| | ||||| |||||||||
Sbjct: 326 catgcttgataattcccaaaaagtagtgggaaaggttggagttttttagaggattgggtt 267
Query: 2938 tatacacatataacttaaaatagcagcttatattatataatattttttgctagttggcat 2997
||| ||||||||||||||||||| | |||| ||||| |||||||||||||||| ||||
Sbjct: 266 -atatacatataacttaaaatagcgggttattttataaaatattttttgctagtgggcaa 208
Query: 2998 tgattttttatttttccaaaacaatggagaaaaatttg 3035
|||||||||||||||||||||| || ||||||||||
Sbjct: 207 aaattttttatttttccaaaacaagggggaaaaatttg 170
Score = 89.7 bits (45), Expect = 3e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 3086 taaaaaatgtattaattttgttatgtgaagtaattttaatgttcctcgcagtattttgtg 3145
||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct: 158 taaaaaaggtattaattttgttataggaagtaattttaatgttcctcgcattattttggg 99
Query: 3146 aacat 3150
|||||
Sbjct: 98 aacat 94
>BF01056B1D02
Length = 778
Score = 133 bits (67), Expect = 2e-30
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 1530 gaaaacatcgtgagaaaacctggtcttataatttcaaattataagattgaaatcgccaac 1589
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gaaaacgtcgtgaggaaacctggtcttataatttcaaattataagattgaaatcgccaac 649
Query: 1590 ccgtctagagcaagcgtgg 1608
|||||| ||||||||||||
Sbjct: 650 ccgtcttgagcaagcgtgg 668
>BF01052B1H02
Length = 790
Score = 109 bits (55), Expect = 3e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 1530 gaaaacatcgtgagaaaacctggtcttataatttcaaattataagattgaaatcgccaac 1589
|||||||||||||| ||||||||||||||||||| |||| || || ||||||||||||||
Sbjct: 422 gaaaacatcgtgaggaaacctggtcttataatttgaaataattagtttgaaatcgccaac 363
Query: 1590 ccgtctagagcaagcgtgg 1608
|||||| ||||||||||||
Sbjct: 362 ccgtcttgagcaagcgtgg 344
>BF01031B1E12
Length = 730
Score = 103 bits (52), Expect = 2e-21
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1530 gaaaacatcgtgagaaaacctggtcttataattt-caaattataagattgaaatcgccaa 1588
|||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 62 gaaaacatcgtgaggaaacctggtcttatgattagcaaagtataagattgaaatcgccaa 121
Query: 1589 cccgtctagagcaagcgtgg 1608
||||||| ||||||||||||
Sbjct: 122 cccgtcttgagcaagcgtgg 141
>BF01023A2A12
Length = 723
Score = 79.8 bits (40), Expect = 3e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1537 tcgtgagaaaacctggtcttataatttcaaattataagattgaaatcgccaa 1588
||||||| |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 196 tcgtgaggaaacctggtcttataatttcaaattataagtttgaaatcaccaa 247
>BF01040A1G09
Length = 753
Score = 75.8 bits (38), Expect = 4e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1559 aatttcaaattataagattgaaatcgccaacccgtctagagcaagcgtgg 1608
|||||||||||||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtgg 59
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 355,276
Number of extensions: 10395
Number of successful extensions: 10395
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 10392
Number of HSP's successfully gapped: 9
Length of query: 3370
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3352
Effective length of database: 8,109,745
Effective search space: 27183865240
Effective search space used: 27183865240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)