BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09518 (UTR included)
(1869 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2037_C1 1612 0.0
>BF14_2037_C1
Length = 841
Score = 1612 bits (813), Expect = 0.0
Identities = 834/841 (99%)
Strand = Plus / Plus
Query: 364 tacgatttctgctaattgacaaatattatttggtggtttttgttttggtattacatgttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacgatttctgctaattgacaaatattatttggtggtttttgttttggtattacatgttt 60
Query: 424 tagattcaaagttaattaagaatacatttaaaaattatcataactttgtaaaataataac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagattcaaagttaattaagaatacatttaaaaattatcataactttgtaaaataataac 120
Query: 484 attaaatatcttcaaagatgatggactgcattgacgacaacaccaacgatcccctctcag 543
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 attaaatatcttcaaagatgatggactgcattgacgacaacaccaatgatcccctctcag 180
Query: 544 cccaagtgtcctcgccgtctggagaaactaaagttgataagaaaaaacccaacgagaatg 603
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 cccaagtgtcctcgccgtctggagatactaaagttgataagaaaaaacccaacgagaatg 240
Query: 604 tctcgttagcggataacagtttactggtggatatatcagacgctttgagcgagaaagaga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctcgttagcggataacagtttactggtggatatatcagacgctttgagcgagaaagaga 300
Query: 664 aagtaaagtttacggtacacaccaagacaacgttgcctgaatttcagaagtctgagtttt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagtaaagtttacggtacacaccaagacaacgttgcctgaatttcagaagtctgagtttt 360
Query: 724 ttgtcgtccgacagcacgaggaatttgtgtggcttcatgacagatatgaagagaatgaag 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgtcgtccgacagcacgaggaatttgtgtggcttcatgacagatatgaagagaatgaag 420
Query: 784 aatacgctggttatattattcctcctgcccctccccgtcccgacttcgacgcatccaggg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatacgctggttatattattcctcctgcccctccccgtcccgacttcgacgcatccaggg 480
Query: 844 agaagttacaacggctcggggaaggagaaggagccctaacacgagaggaattcctcaaga 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaagttacaacggctcggggaaggagaaggagccctaacacgagaggaattcctcaaga 540
Query: 904 tgaaggaggaactcgaggaggaatacttggccactttcaagaagaccgtggctatgcacg 963
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 541 tgaaggaggaactcgaggaggagtacttggcgactttcaagaagaccgtggctatgcacg 600
Query: 964 aggtgttcctgcagcggttggcatcacaccctgtattcaggggggatgcgcatttgagag 1023
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 601 aggtgttcctgcagcggttggcatcacaccctgtattcaggggggatgcacatttgagag 660
Query: 1024 tattcctcgagtacgaacaggatctatgtgcgaagccgcggggcagaatggaccttattg 1083
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 661 tattcctcgagtacgaacaggatctatgtgcaaagccgcggggcagaatggaccttattg 720
Query: 1084 ggggtctgatgaggtcaatgaccactaccacagatgagatttatctcggtgctacagtca 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggggtctgatgaggtcaatgaccactaccacagatgagatttatctcggtgctacagtca 780
Query: 1144 gggacgttaacgacttcttcgaacaggagacagcgtttctccaagaatattattctcatc 1203
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 781 gggacgttaacgacttcttcgaacaggagacagcgttcctccaagaatattattctcatc 840
Query: 1204 t 1204
|
Sbjct: 841 t 841
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,279
Number of extensions: 10363
Number of successful extensions: 10363
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10363
Number of HSP's successfully gapped: 1
Length of query: 1869
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1852
Effective length of database: 8,119,229
Effective search space: 15036812108
Effective search space used: 15036812108
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)