BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09525 (UTR included)
(1576 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3368_C1 1176 0.0
>BF14_3368_C1
Length = 995
Score = 1176 bits (593), Expect = 0.0
Identities = 614/621 (98%)
Strand = Plus / Plus
Query: 372 tgactttacgatagtgacaaataaatttgacaaatctggataaaacattcattagatatt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgactttacgatagtgacaaataaatttgacaaatctggataaaacattcattagatatt 61
Query: 432 gttatttaccaagtgtacaagttataaacgcataagtttaaacagtacaatacacaaaat 491
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62 gttatttatcaagtgtacaagttataaacgcataagtttaaacagtacaataaacaaaat 121
Query: 492 aaacgtaaaatgagctcaggtttcatatcagaatcagaaatattagaggcgagacgccgg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaacgtaaaatgagctcaggtttcatatcagaatcagaaatattagaggcgagacgccgg 181
Query: 552 cgtcaagaagaatgggaaaaagtccgaacggaagatcaaccaaaagaggcgcctgaggaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgtcaagaagaatgggaaaaagtccgaacggaagatcaaccaaaagaggcgcctgaggaa 241
Query: 612 gcgtatgacacccggcctctataccaacgactggaggaacagcgaatgaagaaagaagct 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcgtatgacacccggcctctataccaacgactggaggaacagcgaatgaagaaagaagct 301
Query: 672 gaatatgaagaggcacacaaacttaagaatatgataagaggattagatgatgatgaagtg 731
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 302 gaatatgaagaggcacacaaacttaagaatatgataagagggttagatgatgatgaagtg 361
Query: 732 ggcttcttagacctggttgagagaactaaagcggaggtcgcacagcagatcagcatcgaa 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 362 ggcttcttagacctggttgagagaactaaagcggaggtcgcacagcagatcagcatcaaa 421
Query: 792 gaacaaaaagaaatgaaggaattcagagaaagagtatcgagtctggcagagagtgaagaa 851
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 422 gaacaaaaagaaatgaaggaattcagagaaagagtatcaagtctggcagagagtgaagaa 481
Query: 852 ttgagtcgtcttagggcacaacttgctccgactaaggctccacccacacaacacaacaga 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgagtcgtcttagggcacaacttgctccgactaaggctccacccacacaacacaacaga 541
Query: 912 aacaaactcgaaggggtggtcgtaagaaaacggaaagcgagtgaagttgaagacagtggt 971
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 542 aacaaactcgaaggggtggtcgtaaggaaacggaaagcaagtgaagttgaagacagtggt 601
Query: 972 ccaccgacaaagaacggagtt 992
|||||||||||||||||||||
Sbjct: 602 ccaccgacaaagaacggagtt 622
Score = 335 bits (169), Expect = 1e-91
Identities = 178/181 (98%)
Strand = Plus / Plus
Query: 992 taatgacaagtgtactgacaaaagagatctacttggacgaagatcagatcaagctgataa 1051
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 781 taatgacaagtgtactgacaaaagagatctgcttggacgaagatcagatcaagctgataa 840
Query: 1052 gaaaaaagatgatgataaaaattaatttattgcaattaaaattgtgaggccctcgggcta 1111
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 841 gaaaaaagatgatgataaaaattaatttattgcaaataaaattgtgaggccctcgggcta 900
Query: 1112 taaatatagggagttgggagagatttcattgtgtctattaaatataagatgtaatttacc 1171
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 taagtatagggagttgggagagatttcattgtgtctattaaatataagatgtaatttacc 960
Query: 1172 t 1172
|
Sbjct: 961 t 961
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,548
Number of extensions: 6442
Number of successful extensions: 6442
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6442
Number of HSP's successfully gapped: 2
Length of query: 1576
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1559
Effective length of database: 8,119,229
Effective search space: 12657878011
Effective search space used: 12657878011
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)