BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09533 (UTR included)
(1585 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2H03 387 e-107
BF01010A2E01 224 3e-58
>BF01050A2H03
Length = 764
Score = 387 bits (195), Expect = e-107
Identities = 201/203 (99%)
Strand = Plus / Plus
Query: 613 agcagccgctaaaggcacgggaattatactgtgaattatgcgatgtgcacataacgtcta 672
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 562 agcagcctctaaaggcacgggaattatactgtgaattatgcgatgtgcacataacatcta 621
Query: 673 aaatacactctgaatcacattactctggaaagccacatagagcaattgttgatggtcgca 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaatacactctgaatcacattactctggaaagccacatagagcaattgttgatggtcgca 681
Query: 733 aggtcccgaagaatccatttttaatacagagaggaatggaggagagattggatttattaa 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aggtcccgaagaatccatttttaatacagagaggaatggaggagagattggatttattaa 741
Query: 793 tacgtcgcgaaaagaaattcctc 815
|||||||||||||||||||||||
Sbjct: 742 tacgtcgcgaaaagaaattcctc 764
Score = 176 bits (89), Expect = 7e-44
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 522 gcacgtttgcactatataagcaaaaaccatcagaagaagcaaaaaaaatggttaacatca 581
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104 gcacgtttgcactatataagcaaaaatcatcagaagaagcaaaaaaaatggttaacatca 163
Query: 582 agatcggatgtaggatcacatcgcattaaagag 614
|||||||||||||||||||||||||||||||||
Sbjct: 164 agatcggatgtaggatcacatcgcattaaagag 196
>BF01010A2E01
Length = 874
Score = 224 bits (113), Expect = 3e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 892 agacctcagtgacatgtagtgagcagatggtaatgcatttgaatggtaaacgtcatctgg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 agacctcagtgacatgtagtgagcagatggtaatgcatttgaatggtaaacgtcatctgg 88
Query: 952 ggaaagaaaagcaacatatactcaaagtgatgaaaggtgacaaccctgaaagt 1004
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ggaaagaaaagcaacatatactcaaagtgatgaaaggtgacaaccctgaaagt 141
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,091
Number of extensions: 4950
Number of successful extensions: 4950
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4950
Number of HSP's successfully gapped: 3
Length of query: 1585
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1568
Effective length of database: 8,119,229
Effective search space: 12730951072
Effective search space used: 12730951072
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)