BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09543 (UTR included)
(1315 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2B01 815 0.0
BF01029B1G09 109 1e-23
>BF01031B2B01
Length = 791
Score = 815 bits (411), Expect = 0.0
Identities = 417/419 (99%)
Strand = Plus / Plus
Query: 52 aggtggctcagtcaacaaggaagctggactcatgtatgcggggaccataccgggttatga 111
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 373 aggtggctcagtcaacaaggaagctggactcatgtatgcggggaccataccggattatga 432
Query: 112 agacactatcacactgccgatatgagctgcagatgttagctggctcatacggcaaatcga 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agacactatcacactgccgatatgagctgcagatgttagctggctcatacggcaaatcga 492
Query: 172 ctcgagcagctgcggaatatatggtcccgtggaagtgagaatggactcccgatgtgtgtt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctcgagcagctgcggaatatatggtcccgtggaagtgagaatggactcccgatgtgtgtt 552
Query: 232 ctgctttctttgatggtgaggtatttgccttattctgcctgaaattttgactaaaactcc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctgctttctttgatggtgaggtatttgccttattctgcctgaaattttgactaaaactcc 612
Query: 292 ttttgagattttattgaaacttaatcccattgtgttatttattttaattttgttttgaca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttttgagattttattgaaacttaatcccattgtgttatttattttaattttgttttgaca 672
Query: 352 caaatctctaaatgtattggggttaaagcgaggagacatgagttacttgttacgatgtga 411
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 673 caaatctctaaatgtattggggttaaagcgaggagacatgagtttcttgttacgatgtga 732
Query: 412 gcgtttgtcttggagtgtatcggacacgctgtattagaggttagatctctgggtctggg 470
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gcgtttgtcttggagtgtatcggacacgctgtattagaggttagatctctgggtctggg 791
>BF01029B1G09
Length = 784
Score = 109 bits (55), Expect = 1e-23
Identities = 165/197 (83%), Gaps = 6/197 (3%)
Strand = Plus / Minus
Query: 968 tcgtaacgcgcgttggtgtgatagtttagtcgttagtagattttcgaagtgtgtttaaat 1027
||||||||||||||||||||| || ||| ||| | ||||||||||| | ||||||||||
Sbjct: 585 tcgtaacgcgcgttggtgtgaaagattaatcgatcgtagattttcg--gagtgtttaaat 528
Query: 1028 ctttcgattgtattatattcggatttcatttaacgattagtttaaatcaagatagttgaa 1087
|||||| |||| | ||||| |||||||| | | ||| |||||||||| ||| ||||||
Sbjct: 527 ctttcgtttgtgt--tattcagatttcatctcaagataagtttaaatcgagacggttgaa 470
Query: 1088 agttattcatttagaattg-tttttatttttgtgtaaatttaataaatttgcagtggaat 1146
||||||| | ||| ||||| |||||| |||||||| |||||||||||| |||| |||
Sbjct: 469 agttattaaattaaaattgttttttagttttgtgt-tatttaataaattattagtgaaat 411
Query: 1147 tgtatcgaatgttattt 1163
|||||||||| ||||||
Sbjct: 410 tgtatcgaatattattt 394
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 129,335
Number of extensions: 2329
Number of successful extensions: 2329
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2326
Number of HSP's successfully gapped: 2
Length of query: 1315
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1298
Effective length of database: 8,119,229
Effective search space: 10538759242
Effective search space used: 10538759242
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)