BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09552 (UTR included)
(3109 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B1F08 781 0.0
>BF01057B1F08
Length = 523
Score = 781 bits (394), Expect = 0.0
Identities = 403/405 (99%), Gaps = 2/405 (0%)
Strand = Plus / Minus
Query: 2705 aaaataaagcataatataattttattacgaaacttccagtcaataacactgaaccattcc 2764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaaataaagcataatataattttattacgaaacttccagtcaataacactgaaccattcc 432
Query: 2765 ataaacagtgtctgatttaatacgattagtcatagatggggacaatttcactgttatgcc 2824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ataaacagtgtctgatttaatacgattagtcatagatggggacaatttcactgttatgcc 372
Query: 2825 aaaacaacaaacttagctaataaaaactcgtctataagtcatcgtaaacggcacaaagtt 2884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaacaacaaacttagctaataaaaactcgtctataagtcatcgtaaacggcacaaagtt 312
Query: 2885 acgcgaaattgtaacctctatggggtggaataaatggcctttaaaatttacacagccttt 2944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acgcgaaattgtaacctctatggggtggaataaatggcctttaaaatttacacagccttt 252
Query: 2945 tgattatttactacatgttacaaaacagatcagtggtgctaacagtaacatgtaccttgt 3004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgattatttactacatgttacaaaacagatcagtggtgctaacagtaacatgtaccttgt 192
Query: 3005 ctggtgataccaatgtatttacaaaacttcagaggcagtggtccaaactgaacatcgtac 3064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctggtgataccaatgtatttacaaaacttcagaggcagtggtccaaactgaacatcgtac 132
Query: 3065 gaactagtctcggtgtcaacacacttacaatcgcatttacagccc 3109
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 131 gaactagtctcggtgtca--acacttacaatcgcatttacagccc 89
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 446,536
Number of extensions: 22956
Number of successful extensions: 22956
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22955
Number of HSP's successfully gapped: 1
Length of query: 3109
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3091
Effective length of database: 8,109,745
Effective search space: 25067221795
Effective search space used: 25067221795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)