BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09568 (UTR included)
(1603 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1C02 184 3e-46
BF01011A1H06 155 3e-37
BF14_729_C2 123 9e-28
BF01052B1F12 107 5e-23
BF01025B2E05 101 3e-21
BF01012A1E04 98 5e-20
BF01012A1B09 98 5e-20
BF14_729_C3 86 2e-16
BF01056A1B08 84 8e-16
BF01049B2H03 80 1e-14
BF01049A2D11 76 2e-13
BF14_1695_C1 74 8e-13
BF01061B1E05 70 1e-11
BF01017A2H11 70 1e-11
>BF01022B1C02
Length = 769
Score = 184 bits (93), Expect = 3e-46
Identities = 105/109 (96%)
Strand = Plus / Minus
Query: 1 ttatttccacccactagaactattacccgacatttgttattatatagaataaacacggac 60
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 117 ttatttccaaccactagaactattacccaacatttgttattatatagaataaacacggac 58
Query: 61 gtttgaaaagttacttaatttcatcgtaaattttaagactaaaaatcaa 109
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 57 gtttgaaaagttacttggtttcatcgtaaattttaagactaaaaatcaa 9
>BF01011A1H06
Length = 739
Score = 155 bits (78), Expect = 3e-37
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 1379 tagtttttttcaaaaataaatcacgcgtagtttatccgaaaaatactagtttcatttaaa 1438
|||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 515 tagtcttttacaaaaataaatcacgcgtagtttatccgaaaaatactagattcatttaaa 574
Query: 1439 tgaataaaactcgcgaaaatcttagatctcatta 1472
||||||||| ||||||||||||||||||||||||
Sbjct: 575 tgaataaaagtcgcgaaaatcttagatctcatta 608
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 1308 taaatgaaactagtatttttcggataaactacgcgtgatttatttttgaaaaaaaactac 1367
|||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 572 taaatgaatctagtatttttcggataaactacgcgtgatttatttttg-taaaagactac 514
Query: 1368 atactccc 1375
||||||||
Sbjct: 513 atactccc 506
>BF14_729_C2
Length = 1289
Score = 123 bits (62), Expect = 9e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 1379 tagtttttttcaaaaataaatcacgcgtagtttatccgaaaaatactagtttcatttaaa 1438
|||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct: 583 tagtttttaacaaaaataaagcacgcgtagtttatccgaataattctagtttcatttaaa 642
Query: 1439 tgaataaaactcgcgaaaatcttagatctcatta 1472
||| ||||||| |||||| |||||||||||||||
Sbjct: 643 tgattaaaactggcgaaagtcttagatctcatta 676
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 1308 taaatgaaactagtatttttcggataaactacgcgtgatttatttttgaaaaaaaactac 1367
||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct: 640 taaatgaaactagaattattcggataaactacgcgtgctttatttttg-ttaaaaactac 582
Query: 1368 atactccc 1375
||||||||
Sbjct: 581 atactccc 574
>BF01052B1F12
Length = 785
Score = 107 bits (54), Expect = 5e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1389 caaaaataaatcacgcgtagtttatccgaaaaatactagtttcatttaaatgaataaaac 1448
|||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 378 caaaaataaaagacgcgaagtatatccgaaaaatattagtttcatttaaatgaataaaac 319
Query: 1449 tcgcgaaaatcttagatctcat 1470
|||||||| |||||||| ||||
Sbjct: 318 tcgcgaaattcttagatttcat 297
>BF01025B2E05
Length = 759
Score = 101 bits (51), Expect = 3e-21
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1411 tatccgaaaa-atactagtttcatttaaatgaataaaactcgcgaaaatcttagatctca 1469
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 59 tatccgaaaatatactagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 118
Query: 1470 tta 1472
|||
Sbjct: 119 tta 121
>BF01012A1E04
Length = 841
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1402 cgcgtagtttatccgaaaa-atactagtttcatttaaatgaataaaactcgcgaaaatct 1460
|||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 550 cgcgtagtatatccgaaaatatattagtttcatttaaatgaataaaactcgcgaaagtct 609
Query: 1461 tagatctca 1469
|||||||||
Sbjct: 610 tagatctca 618
>BF01012A1B09
Length = 841
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 1402 cgcgtagtttatccgaaaaatactagtttcatttaaatgaataaaactcgcgaaaatctt 1461
|||||||| ||||||||| ||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 773 cgcgtagtgtatccgaaatatattagtttcatttaaatgaataaaactcgcgacagtctt 714
Query: 1462 agatctcat 1470
|||||||||
Sbjct: 713 agatctcat 705
>BF14_729_C3
Length = 2041
Score = 85.7 bits (43), Expect = 2e-16
Identities = 63/69 (91%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 1402 cgcgtagtttatccgaaaaatactagtttcatttaaatgaataaaactcgcgaaaatctt 1461
|||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct: 1664 cgcgtagtatatccgaataatactagcttcatttaaatgaat---actcgcgaaaatctt 1720
Query: 1462 agatctcat 1470
|||||||||
Sbjct: 1721 agatctcat 1729
>BF01056A1B08
Length = 761
Score = 83.8 bits (42), Expect = 8e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 1425 tagtttcatttaaatgaataaaactcgcgaaaatcttagatctcat 1470
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 141 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctcat 96
>BF01049B2H03
Length = 832
Score = 79.8 bits (40), Expect = 1e-14
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 1412 atccgaaaaatactagtttcatttaaatgaataaaactcgcgaaaatcttagatctcatt 1471
|||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 297 atccgaaaaatattagtttcatttaaatgaat---actcgctaaaatcttagatctcatt 353
Query: 1472 at 1473
||
Sbjct: 354 at 355
>BF01049A2D11
Length = 776
Score = 75.8 bits (38), Expect = 2e-13
Identities = 48/50 (96%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 1321 tatttttcggataaactacgcgtgatttatttttgaaaaaaaactacata 1370
|||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 556 tatttttcggataaactacgcgtgatttattttt-ataaaaaactacata 604
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 1437 aatgaataaaactcgcgaaaatcttagatctcattat 1473
|||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatgaataaaactcgcgaaaatcttagatctcattat 466
Score = 73.8 bits (37), Expect = 8e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 1379 tagtttttttcaaaaataaatcacgcgtagtttatccgaaaaata 1423
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 600 tagttttttataaaaataaatcacgcgtagtttatccgaaaaata 556
>BF14_1695_C1
Length = 1407
Score = 73.8 bits (37), Expect = 8e-13
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 1422 tactagtttcatttaaatgaataaaactcgcgaaaatcttagatctcatta 1472
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1067 tactagtttcatttaaatgaata---ctcgcgaaaatcttagatctcatta 1020
>BF01061B1E05
Length = 745
Score = 69.9 bits (35), Expect = 1e-11
Identities = 46/49 (93%), Gaps = 3/49 (6%)
Strand = Plus / Plus
Query: 1421 atactagtttcatttaaatgaataaaactcgcgaaaatcttagatctca 1469
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9 atactagtttcatttaaatgaat---actcgcgaaaatcttagatctca 54
>BF01017A2H11
Length = 713
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1323 tttttcggataaactacgcgtgatttatttttgaaaaaaaact 1365
|||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 132 tttttcggataaactacgcgtgctttatttttgtaaaaaaact 90
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,351
Number of extensions: 19370
Number of successful extensions: 19370
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 19363
Number of HSP's successfully gapped: 18
Length of query: 1603
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1586
Effective length of database: 8,119,229
Effective search space: 12877097194
Effective search space used: 12877097194
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)