BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09585 (UTR included)
(1210 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 149 1e-35
BF01010B2F09 115 2e-25
BF01023A2A12 113 7e-25
BF01029B2F12 111 3e-24
BF01056B1D02 92 2e-18
>BF01037B1H08
Length = 758
Score = 149 bits (75), Expect = 1e-35
Identities = 124/139 (89%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 594 agtcgtggtggcctggagggtaaagccccgtctctcacacgtgagggtgcgggttcgaaa 653
|||||| |||||||||||| ||||| |||| |||||| |||||| || ||||||||||||
Sbjct: 70 agtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaa 129
Query: 654 cctggcaattcccaatgtgat-atttccgagtcgtatgtactttctaagagtattcagac 712
|||||||| | |||||||||| |||||||||| |||||||||||||||| |||| || |
Sbjct: 130 cctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtc 189
Query: 713 accactgacggacggtgag 731
|||||||||||||||||||
Sbjct: 190 accactgacggacggtgag 208
>BF01010B2F09
Length = 764
Score = 115 bits (58), Expect = 2e-25
Identities = 119/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 601 gtggcctggagggtaaagccccgtctctcacacgtgagggtgcgggttcgaaacctggca 660
|||| ||||||| ||||| || | ||||||||||||| | |||||||||||||||| ||
Sbjct: 544 gtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgaca 485
Query: 661 attcccaatgtgatatttc-cgagtcgtatgtactttctaagagtattcagacaccactg 719
| | |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 484 agtaccaatgtgatcttcatcgagtcatatgtactttctaagagtatttagacgccactg 425
Query: 720 acggacggtgagggagaa 737
||||||||||| ||||||
Sbjct: 424 acggacggtgaaggagaa 407
>BF01023A2A12
Length = 723
Score = 113 bits (57), Expect = 7e-25
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 631 cacgtgagggtgcgggttcgaaacctggcaattcccaatgtgatattt-ccgagtcgtat 689
|||||||||| ||||||| |||||||||||| | |||||||||| ||| ||||||| ||
Sbjct: 87 cacgtgagggcgcgggtt-gaaacctggcaagtaccaatgtgatcttttccgagtcacat 145
Query: 690 gtactttctaagagtattcagacaccactgacggacggtgagggagaac 738
||||||||||| |||||| |||||||||||||||||||||| |||||||
Sbjct: 146 gtactttctaacagtatttagacaccactgacggacggtgaaggagaac 194
>BF01029B2F12
Length = 749
Score = 111 bits (56), Expect = 3e-24
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 635 tgagggtgcgggttcgaaacctggcaattcccaatgtgatatttccgagtcgtatgtact 694
|||||| |||||||||||||||||||| | |||||||||| | | ||| | ||||||||
Sbjct: 671 tgagggcgcgggttcgaaacctggcaagtaccaatgtgatttatgagagacatatgtact 612
Query: 695 ttctaagagtattcagacaccactgacggacggtga 730
||||||||||||| ||||||||||||||||||||||
Sbjct: 611 ttctaagagtatttagacaccactgacggacggtga 576
>BF01056B1D02
Length = 778
Score = 91.7 bits (46), Expect = 2e-18
Identities = 84/94 (89%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 631 cacgtgagggtgcgggttcgaaacctggcaattcccaatgtgatattt-ccgagtcgtat 689
|||||||||| ||||||| |||||||||||| | |||||||||| ||| ||||||| |||
Sbjct: 492 cacgtgagggcgcgggtt-gaaacctggcaagtaccaatgtgatcttttccgagtcatat 550
Query: 690 gtactttctaagagtattcagacaccactgacgg 723
|||||||||||| ||| | |||||||||||||||
Sbjct: 551 gtactttctaagggtagttagacaccactgacgg 584
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 140,149
Number of extensions: 7124
Number of successful extensions: 7124
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 7119
Number of HSP's successfully gapped: 5
Length of query: 1210
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1193
Effective length of database: 8,119,229
Effective search space: 9686240197
Effective search space used: 9686240197
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)