BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09600 (UTR included)
(4345 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3522_C1 914 0.0
>BF14_3522_C1
Length = 813
Score = 914 bits (461), Expect = 0.0
Identities = 478/483 (98%), Gaps = 3/483 (0%)
Strand = Plus / Plus
Query: 3613 tgccaaattcccaacag---cagcttccaggtgtccaacagcatgccctgactggtttga 3669
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccaaattcccaacagatgcagcttccaggtgtccaacagcatgccctgactggtttga 60
Query: 3670 agtgcggcactaagtactccattcgagttaccgctacagatagcgttggcacatccgcac 3729
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgcggtactaagtactccattcgagttaccgctacagatagcgttggcacatccgcac 120
Query: 3730 cagctcatgttgatgttactactttgggtggagcaccagtctcaccattatcgactgact 3789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagctcatgttgatgttactactttgggtggagcaccagtctcaccattatcgactgact 180
Query: 3790 ggctgtggagcaacgctactcacatttacatacagctgagtggttgggacgacggtggtt 3849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggctgtggagcaacgctactcacatttacatacagctgagtggttgggacgacggtggtt 240
Query: 3850 gtgacgtcacaaagtgggacgttgactatcgagctctcggtacaagtttctggcaccgag 3909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgacgtcacaaagtgggacgttgactatcgagctctcggtacaagtttctggcaccgag 300
Query: 3910 ctgataatttagctactttagatcccaaccttggttggggctacaattacgcgcgattac 3969
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgataatttagctactttagatccaaaccttggttggggctacaattacgcgcgattac 360
Query: 3970 ctacatcttacgcgctcggctcccttacccctgggacgtggtaccaagtccgcgtgactg 4029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacatcttacgcgctcggctcccttacccctgggacgtggtaccaagtccgcgtgactg 420
Query: 4030 catacaatgatgctggaacagccgctacagtatacacgtacgctaccaagacggaagatg 4089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catacaatgatgctggaacagccgctacagtatacacgtacgctaccaagacggaagatg 480
Query: 4090 gtg 4092
|||
Sbjct: 481 gtg 483
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 406,924
Number of extensions: 7440
Number of successful extensions: 7440
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7439
Number of HSP's successfully gapped: 1
Length of query: 4345
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4327
Effective length of database: 8,109,745
Effective search space: 35090866615
Effective search space used: 35090866615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)