BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09610 (UTR included)
(2389 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2C08 1283 0.0
>BF01021B2C08
Length = 734
Score = 1283 bits (647), Expect = 0.0
Identities = 707/727 (97%)
Strand = Plus / Plus
Query: 424 taatattatgaaatttcgttgaaggaattaaaataaattttatgacttaaaacaagttta 483
|||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||
Sbjct: 8 taatattatgaaatctcgttgaaggaattaaaattatttttatgacataaaacaagtttc 67
Query: 484 agttatcaaagtttaaaatggttgtgtgccgaagttttcaagaaatatttgattcgatag 543
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 68 agttgacaaagtttaaaatggttgtgtgccgaagttttcaagaaatatttgaatcgatag 127
Query: 544 atataaactcgccacttagtttacccaagtataagaataatgtattacaaatcgaattta 603
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atataaattcgccacttagtttacccaagtataagaataatgtattacaaatcgaattta 187
Query: 604 caaacacgaagaccaatgaaacagtgtataatataaaaccgtcgctaccatttgctgcta 663
|||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 caaaaacaaagactaatgaaacagtgtataatataaaaccgtcgctaccatttgctgcta 247
Query: 664 gtgatatttactattcttctataattagttcaagaagattgactgcactggatagtaatt 723
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 248 gtgatatttactattcttctataattagttcaagaagattgactgcgctagatagtaatt 307
Query: 724 gcaaggctgtgtatgaaatatcattaaatattgagggtagcatttttattttcacaccgg 783
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 308 gcaaggctgtgtatgaaatatcattaaatattgagggtagcaattttatttttacaccgg 367
Query: 784 gagacacaatagccattataccacataataaaaaatctgaagtggactttatattgaatc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gagacacaatagccattataccacataataaaaaatctgaagtggactttatattgaatc 427
Query: 844 acttgaatgttaaggaagtactatacaatgattataaactcagtttggacagtggacaga 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acttgaatgttaaggaagtactatacaatgattataaactcagtttggacagtggacaga 487
Query: 904 aaggagctaagatcccagtgcacatccccattaaatcaaatttatactatgtactaacac 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaggagctaagatcccagtgcacatccccattaaatcaaatttatactatgtactaacac 547
Query: 964 actgcgttgatttaagagctgtaattaaaaagctatttctattagcattatctacacaca 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 actgcgttgatttaagagctgtaattaaaaagctatttctattagcattatctacacaca 607
Query: 1024 ctaaagacgagaatgagagaaagttattggaatatctttgtagttccgaaggctctgaag 1083
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 608 ctaaagacgagaatgagagaaagttattggaatatctttgtagttctgaaggctctgaag 667
Query: 1084 cttataacgatcacatattgaacaaggggacgtgtattcttgatatatttaatacattta 1143
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 668 cttataacgatcacatattgaacaaagggacatgtattctggatatatttaatacattta 727
Query: 1144 agtcctg 1150
|||||||
Sbjct: 728 agtcctg 734
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 429,050
Number of extensions: 24398
Number of successful extensions: 24398
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 24398
Number of HSP's successfully gapped: 1
Length of query: 2389
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2372
Effective length of database: 8,119,229
Effective search space: 19258811188
Effective search space used: 19258811188
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)