BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09620 (UTR included)
(4696 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1F08 1465 0.0
>BF01043B1F08
Length = 783
Score = 1465 bits (739), Expect = 0.0
Identities = 763/771 (98%)
Strand = Plus / Plus
Query: 3735 aagcccaagacgtccagcgtgaaggaacatcccgaagccatgactcactcagacgaaaag 3794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aagcccaagacgtccagcgtgaaggaacatcccgaagccatgactcactcagacgaaaag 72
Query: 3795 gacacctgctccatagaagacccgccgcggcataataacgacgaagtcacaacgtcaccg 3854
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 73 gacacctgctccatagaagacccgccgcggcataataacgacgaagttacaacgtcaccg 132
Query: 3855 ccacaagcagtccccgagcctatagcggagaaacgaagcgtctttgatacgaagttcagc 3914
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 133 ccacaagcagtccccgagccgatagcggagaaacgaagcgtcttcgatacgaagttcagc 192
Query: 3915 tcgggaatgatcagtcccgagaaacctgtgaactactgtgacgaaggaaccccggggtac 3974
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 193 tcgggaatgatcagtcccgagaaacctgtgaactactgtgacgaaggaacccctgggtac 252
Query: 3975 ttctccagggtcagctcgctcagtagtctgggcgaacccacacaagaagacagcctggcc 4034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttctccagggtcagctcgctcagtagtctgggcgaacccacacaagaagacagcctggcc 312
Query: 4035 aagaagaacgctcaggcatccatcaatgttgacccgagccctcaggagcaaagcactagt 4094
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 313 aagaagaacgctcaggcatccatcaatgtcgacccgagccctcaggagcaaagcactagt 372
Query: 4095 agttcaggaaaagataaagaaggatctaaggcggtgacgttcgccacggaggccgtgtcg 4154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agttcaggaaaagataaagaaggatctaaggcggtgacgttcgccacggaggccgtgtcg 432
Query: 4155 atcgagtcgtccaccccgccccgcttcatagaggacactcctcttatgttcagtcggtcc 4214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atcgagtcgtccaccccgccccgcttcatagaggacactcctcttatgttcagtcggtcc 492
Query: 4215 agctcgctgggatccctgccggagtgctcgcagcaagacgaccagggctcggtggtgtcg 4274
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 493 agctcgctgggatccctgccggagtgctcgcagcaggacgaccagggctcggtggtgtcg 552
Query: 4275 gagatcagccggttgacctcgggctgcatctcccccagcgagatcccggactcccccggc 4334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gagatcagccggttgacctcgggctgcatctcccccagcgagatcccggactcccccggc 612
Query: 4335 cagtccgtgccgctctccccacgggcccagctgtctccaaggattcctcccatacatcac 4394
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 613 cagtccatgccgctctccccacgggcccagctctctccaaggattcctcccatacatcac 672
Query: 4395 gtggagttattgtcgtctgtgttcgaggagcggccggcacagttcgtggtggaaaacact 4454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtggagttattgtcgtctgtgttcgaggagcggccggcacagttcgtggtggaaaacact 732
Query: 4455 ccggcacacttctcagccaacaccagcctctccagcctcaccatcaacgac 4505
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ccggcacacttctcagccaacaccagcctctccagcctcaccatcaacgac 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 379,377
Number of extensions: 5809
Number of successful extensions: 5809
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5809
Number of HSP's successfully gapped: 1
Length of query: 4696
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4678
Effective length of database: 8,109,745
Effective search space: 37937387110
Effective search space used: 37937387110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)