BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09632 (UTR included)
(1411 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1589_C1 1628 0.0
>BF14_1589_C1
Length = 851
Score = 1628 bits (821), Expect = 0.0
Identities = 845/853 (99%), Gaps = 2/853 (0%)
Strand = Plus / Plus
Query: 372 atcgagcattagaattaattgagcaacaggaagagaaacaagtcgcagtttgcatcaaag 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgagcattagaattaattgagcaacaggaagagaaacaagtcgcagtttgcatcaaag 60
Query: 432 gaatattcaattactacctgcagttgtgaaaaattaacaaattttatttaaggaggcaca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gaatattcaattactacctgcagttgtgaaaaattaacaaattttatttaaggagacaca 120
Query: 492 atagtcaaaatgactctaggaacctataataggcatcaagccgaacgcaagaaacaagcg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagtcaaaatgactctaggaacctataataggcatcaagccgaacgcaagaaacaagcg 180
Query: 552 gctcttgcagcggctttccctcagggcattcgttgccagaagtgtttggaatatgggcat 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctcttgcagcggctttccctcagggcattcgttgccagaagtgtttggaatatgggcat 240
Query: 612 tggagttacgagtgtaaggggaagcgtaagatacttgtacgtccatcccgatcgcaaata 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggagttacgagtgtaaggggaagcgtaagatacttgtacgtccatcccgatcgcaaata 300
Query: 672 ttgaaaaagaatttgcaatcaaagcaagaaagtgcttgcagcaatggaaaatgcaaagtt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaaaaagaatttgcaatcaaagcaagaaagtgcttgcagcaatggaaaatgcaaagtt 360
Query: 732 ccaaacaaaaagaaaaggcaatcttcagactgctcagattgttctggaagcagctcttcg 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaaacaaaaagaaaaggcaatcttcagactgctcagattgttctggaagcagctcttcg 420
Query: 792 ggcagttcctctgattcatcatcgggcagctcagattcctctgacagcgacagcagcagt 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcagttcctctgattcatcatcgggcagctcagattcctctgacagcgacagcagcagt 480
Query: 852 gactctgagagcagcagcaatggtagcagcagtggctccgaatcttgcagcgactgttaa 911
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 gactctgagagcagcagcaatggtagcagcagtggctccgaatcttgcagcgattgttaa 540
Query: 912 gctatcacatataaaggaatcttctccaagatgcatattcctattcaattgtctatatta 971
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctat--catataaaggaatcttctccaagatgcatattcctattcaattgtctatatta 598
Query: 972 tttatttttctacttgtaccctttttcttaatgagttctcttgctttccgtgtatataat 1031
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 599 tttatttttctacttgtaccctttttcttaatgagctctcttgctttccgtgtatataat 658
Query: 1032 tttttaaatttcttaaaatttttcttaattcgccggtaagttttatatgatgctggtcat 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tttttaaatttcttaaaatttttcttaattcgccggtaagttttatatgatgctggtcat 718
Query: 1092 ttaaaattagtgtaagttatgtgaatgctggcgattttaatatttcgccaacattatatg 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ttaaaattagtgtaagttatgtgaatgctggcgattttaatatttcgccaacattatatg 778
Query: 1152 tcatgattgctgatgaactaggttttattctgtgacttcagttgactctagttgtcttgt 1211
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tcatgattgctgatgaactnnnttttattctgtgacttcagttgactctagttgtcttgt 838
Query: 1212 aaagaattgttgt 1224
|||||||||||||
Sbjct: 839 aaagaattgttgt 851
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,273
Number of extensions: 5776
Number of successful extensions: 5776
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5775
Number of HSP's successfully gapped: 1
Length of query: 1411
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1394
Effective length of database: 8,119,229
Effective search space: 11318205226
Effective search space used: 11318205226
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)