BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09633 (UTR included)
(2725 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2G02 1445 0.0
BF01030A2C06 155 4e-37
BF01056B1D01 133 2e-30
BF01016B1A11 131 6e-30
BF01055A2F06 80 2e-14
>BF01020A2G02
Length = 755
Score = 1445 bits (729), Expect = 0.0
Identities = 741/745 (99%)
Strand = Plus / Plus
Query: 369 cggagagtggtcagttattcactgtttagtgttttcgagtgggacgtcgcaatttaagac 428
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 11 cggagagtggtcagttattcactgtttagtgttttagagtgggacgtcgcaattaaagac 70
Query: 429 aaaaatcctgatccaaaacaaatacccgagcaaaagggttgagatgttcacatataattt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aaaaatcctgatccaaaacaaatacccgagcaaaagggttgagatgttcacatataattt 130
Query: 489 tgctataataatatgtcggcttggtattggggagtgattgccttaaaagtggtttttgca 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgctataataatatgtcggcttggtattggggagtgattgccttaaaagtggtttttgca 190
Query: 549 ttcacttgttttgtttcttcactacgtgctgatgatacggtgcaaaaattgcctttctgt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttcacttgttttgtttcttcactacgtgctgatgatacggtgcaaaaattgcctttctgt 250
Query: 609 aatcccacaacctcgaaagacgcacctaatttcaacgacttgctgattgttagcacttta 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatcccacaacctcgaaagacgcacctaatttcaacgacttgctgattgttagcacttta 310
Query: 669 gatggaaagatctcagcttttgccaccgaaaatggtattaaggcctgggatttggagact 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gatggaaagatctcagcttttgccaccgaaaatggtattaaggcctgggatttggagact 370
Query: 729 cagccattactgtcttctaatttacataatgtcgagctaacatcggatggaaaatgggtg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagccattactgtcttctaatttacataatgtcgagctaacatcggatggaaaatgggtg 430
Query: 789 cgtctagtgccgtccctccgtggcactttgtacagtctgagcggagattcgattgagccc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgtctagtgccgtccctccgtggcactttgtacagtctgagcggagattcgattgagccc 490
Query: 849 ttgccatttagtgcggaacaattattgtcttcatcatttaaatattctgatgatatggtc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttgccatttagtgcggaacaattattgtcttcatcatttaaatattctgatgatatggtc 550
Query: 909 attgctggtgctcgagagacattatggcttggcgttgaagctcaatcaggaagtgtcata 968
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 551 attgctggtgctcgagagacattatggcttggcgtcgaagctcaatcaggaagtgtcata 610
Query: 969 tatgagtgcagttcgagcggatgtaattctgaacaacagacagctggagccggccgggat 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tatgagtgcagttcgagcggatgtaattctgaacaacagacagctggagccggccgggat 670
Query: 1029 atgatagtgttgaggagatactccaccactgtgagagctttggatcctcggtctggcagt 1088
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 671 atgatagtgttgaggagatactccaccacagtgagagctttggatcctcggtctggcagt 730
Query: 1089 gagaaatggaacttcagtgtggctg 1113
|||||||||||||||||||||||||
Sbjct: 731 gagaaatggaacttcagtgtggctg 755
>BF01030A2C06
Length = 599
Score = 155 bits (78), Expect = 4e-37
Identities = 203/244 (83%), Gaps = 8/244 (3%)
Strand = Plus / Minus
Query: 2479 ccactcgacagcgcgtttctcgaggaaggtttcagtgtatagtttgttaagtttctgtat 2538
|||||||| |||| | |||||||||||||||| ||| |||| |||||||||||| |||||
Sbjct: 486 ccactcgaaagcgtgattctcgaggaaggttttagtatataatttgttaagtttttgtat 427
Query: 2539 ttacttgtttgtgatttaa-----tttgttgaagatgtcgggaaaacatgagccctctga 2593
|||||||| ||| |||| ||||||||| |||||| |||||||||||| || ||
Sbjct: 426 ttacttgtgtgtacattaacgatatttgttgaaaatgtcgagaaaacatgagcagtccga 367
Query: 2594 gagggccaagggaccaaaacgctgcctaaagtctttgagatataaaaaaataatatatgg 2653
|| || | |||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 366 ga---ccttttaaagaaaacgctgccttaagtctttgaggtataacaaaataatatatgg 310
Query: 2654 cggaattatgtatcttatacagctctacaaaaaagtccgcgatggcatatgtctattcct 2713
||||||| ||||||||||| || |||||| |||||| | ||||||||||||||||| |||
Sbjct: 309 cggaattttgtatcttatatagatctacagaaaagttcccgatggcatatgtctatacct 250
Query: 2714 taag 2717
||||
Sbjct: 249 taag 246
>BF01056B1D01
Length = 838
Score = 133 bits (67), Expect = 2e-30
Identities = 203/252 (80%), Gaps = 16/252 (6%)
Strand = Plus / Minus
Query: 2479 ccactcgacagcgcgtttctcgaggaaggtttcagtgtatagtttgttaagtttctgtat 2538
|||||||| |||| | |||||||||||||||| ||| |||| |||||||||||| |||||
Sbjct: 822 ccactcgaaagcgtgattctcgaggaaggttttagtatataatttgttaagtttttgtat 763
Query: 2539 ttacttgtttgtgatttaa-------------tttgttgaagatgtcgggaaaacatgag 2585
|||||||| ||| |||| ||||||||| ||||||||||||||||||
Sbjct: 762 ttacttgtgtgtacattaacgcattaacgatatttgttgaaaatgtcgggaaaacatgag 703
Query: 2586 ccctctgagagggccaagggaccaaaacgctgcctaaagtctttgagatataaaaaaata 2645
| ||||||| | || ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 702 cagtctgagannnnntaaaga---aaacgctgccttaagtctttgaggtataacaaaata 646
Query: 2646 atatatggcggaattatgtatcttatacagctctacaaaaaagtccgcgatggcatatgt 2705
|||| |||||||||| ||||||||||| || |||||| |||||| | |||||||||||||
Sbjct: 645 atatttggcggaattttgtatcttatatagatctacagaaaagttcccgatggcatatgt 586
Query: 2706 ctattccttaag 2717
|||| |||||||
Sbjct: 585 ctataccttaag 574
>BF01016B1A11
Length = 786
Score = 131 bits (66), Expect = 6e-30
Identities = 198/239 (82%), Gaps = 11/239 (4%)
Strand = Plus / Minus
Query: 2495 ttctcgaggaaggtttcagtgtatagtttgttaagtttctgtatttacttgtttgtg-at 2553
|||||||| ||||||| ||| |||| |||||| ||||| ||||| ||||||| ||| ||
Sbjct: 496 ttctcgagaaaggttttagtttataatttgtttagtttttgtatctacttgtgtgtacat 437
Query: 2554 tta----atttgttgaagatgtcgggaaaacatgagccctctgagagggccaagggacca 2609
| | ||||||||||||||||||| ||||||||||| ||||||| | || |
Sbjct: 436 tcacgatatttgttgaagatgtcgggtaaacatgagccgcctgagagctttta---acga 380
Query: 2610 aaacgctgcctaaagtctttgagat---ataaaaaaataatatatggcggaattatgtat 2666
||||||||||||||| ||||||||| |||| |||||||||||| | |||||| |||||
Sbjct: 379 aaacgctgcctaaagcctttgagattgtataacaaaataatatatcgtggaattgtgtat 320
Query: 2667 cttatacagctctacaaaaaagtccgcgatggcatatgtctattccttaagcataacat 2725
|||||| || |||||| ||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 319 cttatataggtctacagaaaagtccgcggtggcatatgtctataccttaaggataacat 261
>BF01055A2F06
Length = 787
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 2471 agttatccccactcgacagcgcgtttctcgaggaaggtttcagtgtatagtttgttaagt 2530
||||||| || ||||| |||| | |||||||||||||||| |||||||| ||| ||||||
Sbjct: 683 agttatcaccgctcgatagcgtgattctcgaggaaggttttagtgtataatttattaagt 742
Query: 2531 ttctgtatttacttgt 2546
|| |||||||||||||
Sbjct: 743 ttttgtatttacttgt 758
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,812
Number of extensions: 7196
Number of successful extensions: 7196
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 7195
Number of HSP's successfully gapped: 7
Length of query: 2725
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2708
Effective length of database: 8,119,229
Effective search space: 21986872132
Effective search space used: 21986872132
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)