BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09648 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1D10 1027 0.0
>BF01019A1D10
Length = 662
Score = 1027 bits (518), Expect = 0.0
Identities = 553/562 (98%), Gaps = 7/562 (1%)
Strand = Plus / Plus
Query: 375 ccgattgtttgtaactgtcaataattactaaagtctgtgaccattattctagaaattact 434
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgattgtttgtaactgtcaataaatactaaagtctgtgaccattattctagaaattact 60
Query: 435 gttacagagagtgaaaagattaatattaaatttttaaaatataagtaaactttacacaat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttacagagagtgaaaagattaatattaaatttttaaaatataagtaaactttacacaat 120
Query: 495 tcaaaaatggcccactacaagggtgcagcgtccgaggctgggagagccatgcatctcatg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaaaatggcccactacaagggtgcagcgtccgaggctgggagagccatgcatctcatg 180
Query: 555 aaaaaaa-gagaaaaagctcaacaggaaatagagctgagaaaaaagaaaatagaagaaga 613
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaaaaagagaaaaagctcaacaggaaatagagctgagaaaaaagaaaatagaagaaga 240
Query: 614 tcttaagattgataatattgaaaataagttcgcaactcattatgatgaagtggaacaaca 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttaagattgataatattgaaaataagttcgcaactcattatgatgaagtggaacaaca 300
Query: 674 attaaaaagctcaactataggtctcgtaacattagatgaaatgaaagcaaaacaagaaca 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaaaaagctcaactataggtctcgtaacattagatgaaatgaaagcaaaacaagaaca 360
Query: 734 tatagtacgagaacgagagaaaaagcttgcccaaaaaaaggccgaaaaggaaaaagaacg 793
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 tatagtacgagaacgagagaaaaagcttgctcaaaaaaaggccgaaaaggaaaaagaacg 420
Query: 794 acaaaaagaaatagaagcaaaacaatcccaaaagaataaacaaaaacgacagattcaagc 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaaaagaaatagaagcaaaacaatcccaaaagaataaacaaaaacgacagattcaagc 480
Query: 854 actttcatttgacttcaatgaaggagatg------atgatgatgctgaagaagaaactcc 907
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 actttcatttgacttcaatgaaggagatgatgatgatgatgatgctgaagaagaaactcc 540
Query: 908 atggaaagaacaggaagagacg 929
||||||||||||||||||||||
Sbjct: 541 atggaaagaacaggaagagacg 562
Score = 200 bits (101), Expect = 6e-51
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 985 gagaaagggaggaggctgacctgaaattgagagaggaattaaggctagagtgggtcatga 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gagaaagggaggaggctgacctgaaattgagagaggaattaaggctagagtgggtcatga 621
Query: 1045 cccaagccagtctcaaagatgaaccaatcactgtgacattc 1085
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cccaagccagtctcaaagatgaaccaatcactgtgacattc 662
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 323,396
Number of extensions: 7464
Number of successful extensions: 7464
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7459
Number of HSP's successfully gapped: 2
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)