BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09655 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B2B10 525 e-149
>BF01034B2B10
Length = 804
Score = 525 bits (265), Expect = e-149
Identities = 265/265 (100%)
Strand = Plus / Plus
Query: 343 ttgaatactttctgccgagaacttcctaaaatagtcagttattttttaactatacggcga 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttgaatactttctgccgagaacttcctaaaatagtcagttattttttaactatacggcga 68
Query: 403 cttgattatcattgcattcaatacatttattggaaacgtttatatattttttaaaggaat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cttgattatcattgcattcaatacatttattggaaacgtttatatattttttaaaggaat 128
Query: 463 tacatgcccacctaaatggctctctgagccgttctacaatgctccaacttcaacgttacc 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tacatgcccacctaaatggctctctgagccgttctacaatgctccaacttcaacgttacc 188
Query: 523 ttgcagattctggcgtttcggataggtcaaacgccttcttagatgaatttcaaattggtt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttgcagattctggcgtttcggataggtcaaacgccttcttagatgaatttcaaattggtt 248
Query: 583 caggagataaacgtaatttatcaga 607
|||||||||||||||||||||||||
Sbjct: 249 caggagataaacgtaatttatcaga 273
Score = 375 bits (189), Expect = e-103
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 608 ttgcttccaagtgttcaatattgcacattctttaacaagcactcaagacacattagccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttgcttccaagtgttcaatattgcacattctttaacaagcactcaagacacattagccat 471
Query: 668 ggcaacagcactgacactaaaagagtttgaagatgatggctgttgctacatagaacttcg 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggcaacagcactgacactaaaagagtttgaagatgatggctgttgctacatagaacttcg 531
Query: 728 aagtacaccacgtgacacaccacatatgaccagcagacaatatatcgaaactctcattga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aagtacaccacgtgacacaccacatatgaccagcagacaatatatcgaaactctcattga 591
Query: 788 gactttaaa 796
|||||||||
Sbjct: 592 gactttaaa 600
Score = 254 bits (128), Expect = 5e-67
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 797 cacagccaatacaaatttatcaattatttcatgccttataatatctataaaccgaagtcg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cacagccaatacaaatttatcaattatttcatgccttataatatctataaaccgaagtcg 736
Query: 857 gtcacaatctgaaggagatggtatagcagatttggctattgaatatcacaagaagtatcc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtcacaatctgaaggagatggtatagcagatttggctattgaatatcacaagaagtatcc 796
Query: 917 taatttag 924
||||||||
Sbjct: 797 taatttag 804
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,021
Number of extensions: 6305
Number of successful extensions: 6305
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6305
Number of HSP's successfully gapped: 3
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)