BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09669 (UTR included)
(3475 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B2B06 1459 0.0
BF01046A1E04 775 0.0
>BF01026B2B06
Length = 771
Score = 1459 bits (736), Expect = 0.0
Identities = 756/763 (99%), Gaps = 3/763 (0%)
Strand = Plus / Plus
Query: 420 tgctgtgacttaaaacattattatgaaatatcgtttattaccgaaaaatatatagttatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgctgtgacttaaaacattattatgaaatatcgtttattaccgaaaaatatatagttatg 71
Query: 480 ttagagtaaattgtagggaaaatgcctccttacaaagcagggttgttgaaaagaaaaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttagagtaaattgtagggaaaatgcctccttacaaagcagggttgttgaaaagaaaaaat 131
Query: 540 gagtcccaagagtcaaaaaacagtaattcagaagacaagaacaccaccagtgctgatgag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 132 gagtcccaagagtcaaaaaacagtaattcagaagacaagaacaccaccagtgctgacgag 191
Query: 600 ggagaggagttagtgaaaggcttcctggatgatgaggacgatgctgcagactctgagcct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggagaggagttagtgaaaggcttcctggatgatgaggacgatgctgcagactctgagcct 251
Query: 660 gaggaggacgaacactcagacggagaaagagatgaagttttgtttgaagaacatgattca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaggaggacgaacactcagacggagaaagagatgaagttttgtttgaagaacatgattca 311
Query: 720 acattaggtgatgatgagcaggaaaatgaaacatcagaagctgaatcttctgacctgacc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acattaggtgatgatgagcaggaaaatgaaacatcagaagctgaatcttctgacctgacc 371
Query: 780 gattcagaggaagttgaagaaactgatgaagatgaaggtgacagtagtgagaatgaggaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gattcagaggaagttgaagaaactgatgaagatgaaggtgacagtagtgagaatgaggaa 431
Query: 840 caggtgagcagtgacagtggagcagacactggcatggcgccgataacaacaggcagcagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caggtgagcagtgacagtggagcagacactggcatggcgccgataacaacaggcagcagt 491
Query: 900 gatgaggcagttaggaagataggaggcaagaagaaagtaaaacaagtgaccaagaagaca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatgaggcagttaggaagataggaggcaagaagaaagtaaaacaagtgaccaagaagaca 551
Query: 960 caggaaaagaagaaaaacaataaaacaagtattgaaataatgtctgctaaaatacaagaa 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 caggaaaagaagaaaaacaataaaacaagtattgaaataatgtctgctaaaatacaagaa 611
Query: 1020 gacaaagtgacagcacccgtacaacaaaaaggtgatgagtacgagtctggagacacatcg 1079
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 612 gacaaagtgacagcacccgtacaacaaaaa---gatgagtacgagtctggagacacatcg 668
Query: 1080 gacgaggaggacagaactaacaccgtgggtgacattcccatgtggtggtacaatgagtac 1139
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 669 gacgaggaggacagaactaacaccgtnnntgacattcccatgtggtggtacaatgagtac 728
Query: 1140 ccgcatatcggatacaccttggacggcgagaggatcatcaagc 1182
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ccgcatatcggatacaccttggacggcgagaggatcatcaagc 771
>BF01046A1E04
Length = 802
Score = 775 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Plus
Query: 1053 gatgagtacgagtctggagacacatcggacgaggaggacagaactaacaccgtgggtgac 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gatgagtacgagtctggagacacatcggacgaggaggacagaactaacaccgtgggtgac 467
Query: 1113 attcccatgtggtggtacaatgagtacccgcatatcggatacaccttggacggcgagagg 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 attcccatgtggtggtacaatgagtacccgcatatcggatacaccttggacggcgagagg 527
Query: 1173 atcatcaagccaccacagagggaccagattgatgaattccttaagaagtgttcggatcct 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atcatcaagccaccacagagggaccagattgatgaattccttaagaagtgttcggatcct 587
Query: 1233 gatttctggcgcaccgtaaaggacccacagacgggtcaggacgttgtgctggctcccagc 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gatttctggcgcaccgtaaaggacccacagacgggtcaggacgttgtgctggctcccagc 647
Query: 1293 gacttgagattgctggagagactcagagcctcacgcctgccttccgacactcacgacgac 1352
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 648 gacttgagattgctggagagactcagagcctcacgcctgccctccgacactcacgacgac 707
Query: 1353 tatgagccgtgggtggagtggttcagtcgcgaggtgttggcgacgcctctgcgcgccttc 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tatgagccgtgggtggagtggttcagtcgcgaggtgttggcgacgcctctgcgcgccttc 767
Query: 1413 ccagaacacaagagatcgttcttgccgtctcgctc 1447
|||||||||||||||||||||||||||||||||||
Sbjct: 768 ccagaacacaagagatcgttcttgccgtctcgctc 802
Score = 640 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 727 gtgatgatgagcaggaaaatgaaacatcagaagctgaatcttctgacctgaccgattcag 786
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 13 gtgatgatgagcaggaaaatgaaacatcagaagctgattcttctgacctgaccgattcag 72
Query: 787 aggaagttgaagaaactgatgaagatgaaggtgacagtagtgagaatgaggaacaggtga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aggaagttgaagaaactgatgaagatgaaggtgacagtagtgagaatgaggaacaggtga 132
Query: 847 gcagtgacagtggagcagacactggcatggcgccgataacaacaggcagcagtgatgagg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcagtgacagtggagcagacactggcatggcgccgataacaacaggcagcagtgatgagg 192
Query: 907 cagttaggaagataggaggcaagaagaaagtaaaacaagtgaccaagaagacacaggaaa 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cagttaggaagataggaggcaagaagaaagtaaaacaagtgaccaagaagacacaggaaa 252
Query: 967 agaagaaaaacaataaaacaagtattgaaataatgtctgctaaaatacaagaagacaaag 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agaagaaaaacaataaaacaagtattgaaataatgtctgctaaaatacaagaagacaaag 312
Query: 1027 tgacagcacccgtacaacaaaaaggtg 1053
|||||||||||||||||||||||||||
Sbjct: 313 tgacagcacccgtacaacaaaaaggtg 339
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 384,993
Number of extensions: 24895
Number of successful extensions: 24895
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 24894
Number of HSP's successfully gapped: 3
Length of query: 3475
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3457
Effective length of database: 8,109,745
Effective search space: 28035388465
Effective search space used: 28035388465
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)