BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09672 (UTR included)
(2203 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2C07 1239 0.0
>BF01032A2C07
Length = 775
Score = 1239 bits (625), Expect = 0.0
Identities = 625/625 (100%)
Strand = Plus / Plus
Query: 319 gaccaccgctgctgcctccccagctccaggagcgcctgctgcgggtggccgctctgccgg 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaccaccgctgctgcctccccagctccaggagcgcctgctgcgggtggccgctctgccgg 60
Query: 379 acgacgccgccttcgtgcgtcgtctgcgggacacgctgggctcgctgcctctgccgtcgc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgacgccgccttcgtgcgtcgtctgcgggacacgctgggctcgctgcctctgccgtcgc 120
Query: 439 tgctggtgctgcggtacttgttcgctttcctggcgcatctcgcggaccactccgaccgta 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctggtgctgcggtacttgttcgctttcctggcgcatctcgcggaccactccgaccgta 180
Query: 499 acatgatggacgcgtggaacctcgccatctgtctcgggccgaccctgctggccgcctggg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatgatggacgcgtggaacctcgccatctgtctcgggccgaccctgctggccgcctggg 240
Query: 559 gcgagggcggcgcccaggtcgccgcgcagaatctcgtcaacgagctcgtcaagagagcga 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgagggcggcgcccaggtcgccgcgcagaatctcgtcaacgagctcgtcaagagagcga 300
Query: 619 tcctccaccacgaggaagtgttcccgcaggacgtcgccccgcacgcgctctaccgccgtc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcctccaccacgaggaagtgttcccgcaggacgtcgccccgcacgcgctctaccgccgtc 360
Query: 679 tcgagccttccgacgccgtcgacgccgccgatgaagccgacacgacggacgagccggccg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgagccttccgacgccgtcgacgccgccgatgaagccgacacgacggacgagccggccg 420
Query: 739 aggacgccgcagacgagagaccctccgaggccgccgggaccgcggggcccgacgatgacg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggacgccgcagacgagagaccctccgaggccgccgggaccgcggggcccgacgatgacg 480
Query: 799 acgacgacggacgagacctgtcgctgtacggcgacgacgacgacgacgacgatgacgacg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgacgacggacgagacctgtcgctgtacggcgacgacgacgacgacgacgatgacgacg 540
Query: 859 gcgtcgctggcgagggcgaggcagccgccgcgtggagcaggcccgccgcccacaggtcgt 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgtcgctggcgagggcgaggcagccgccgcgtggagcaggcccgccgcccacaggtcgt 600
Query: 919 ccagcgacgagcgccgcccgcaggt 943
|||||||||||||||||||||||||
Sbjct: 601 ccagcgacgagcgccgcccgcaggt 625
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 170,690
Number of extensions: 4086
Number of successful extensions: 4086
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4068
Number of HSP's successfully gapped: 1
Length of query: 2203
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2186
Effective length of database: 8,119,229
Effective search space: 17748634594
Effective search space used: 17748634594
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)