BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09705 (UTR included)
(1978 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2466_C1 1457 0.0
>BF14_2466_C1
Length = 763
Score = 1457 bits (735), Expect = 0.0
Identities = 747/751 (99%)
Strand = Plus / Plus
Query: 354 atgatattatactttgtgctgtaacaattgcagaaagtccacgttgaacgataaattaat 413
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13 atgatattatactttgtgctgtaacaattgcagaaagtccacgttgaacgattaattaat 72
Query: 414 ttagatatcgcagaaattaaggaattaattaagtaaattaacgagccgttttatttcaaa 473
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ttagatatcgcaaaaattaaggaattaattaagtaaattaacgagccgttttatttcaaa 132
Query: 474 tatattacttagatttacaaaagaataatgagtgaagataagagcgttatactcgtcacc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tatattacttagatttacaaaagaataatgagtgaagataagagcgttatactcgtcacc 192
Query: 534 ggtggttcagggctagtgggacgagcaataaggactgttatagaagaagagagaaaatta 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtggttcagggctagtgggacgagcaataaggactgttatagaagaagagagaaaatta 252
Query: 594 gacagtaaacttgttagaaatgagacttggattttttgtggctccaacgatggggatttg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gacagtaaacttgttagaaatgagacttggattttttgtggctccaacgatggggatttg 312
Query: 654 agagataaagcccaaactgaggcattgtttgaaaaacacagaccaactcatgtaatacat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agagataaagcccaaactgaggcattgtttgaaaaacacagaccaactcatgtaatacat 372
Query: 714 ttagcggccatggtaggaggcctatttcacaacatggctcataatttggatttctttaga 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttagcggccatggtaggaggcctatttcacaacatggctcataatttggatttctttaga 432
Query: 774 gaaaacatgtctataaatgataatgttttgaatgtgagctacaattataaagttaaaaaa 833
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 433 gaaaacatgtctataaatgataatgttttgaacgtgagctacaattataaagttaaaaaa 492
Query: 834 gtagtgtcctgtctctcgacatgcatattccctgataaggtcacctatcccattgatgag 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtagtgtcctgtctctcgacatgcatattccctgataaggtcacctatcccattgatgag 552
Query: 894 actatgatacacaatggtccaccccatccatccaactatggctacagttatgcaaagagg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 actatgatacacaatggtccaccccatccatccaactatggctacagttatgcaaagagg 612
Query: 954 atggttgatattctgaacagagggtatcactctcaacacggttgcatgttcacatcagtg 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atggttgatattctgaacagagggtatcactctcaacacggttgcatgttcacatcagtg 672
Query: 1014 ataccatgtaatgtttttggacctcatgataacttttctctggagtcgagtcatgtcatc 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 ataccatgtaatgtttttggacctcatgataacttttctctggagtcgagtcacgtcatc 732
Query: 1074 cctgccttgatacggagaatggatgatacta 1104
|||||||||||||||||||||||||||||||
Sbjct: 733 cctgccttgatacggagaatggatgatacta 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,932
Number of extensions: 5305
Number of successful extensions: 5305
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5305
Number of HSP's successfully gapped: 1
Length of query: 1978
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1961
Effective length of database: 8,119,229
Effective search space: 15921808069
Effective search space used: 15921808069
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)