BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09706 (UTR included)
(2182 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1335_C1 1649 0.0
>BF14_1335_C1
Length = 995
Score = 1649 bits (832), Expect = 0.0
Identities = 841/844 (99%)
Strand = Plus / Plus
Query: 441 atgtctcgtttggatctcgtgatatttggcgcgacgggcttcacggggaagcatgccgca 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgtctcgtttggatctcgtgatatttggcgcgacgggcttcacggggaagcatgccgca 211
Query: 501 atggagatgtgccacatcgtcaagaagtatcctggcatgagttggggagtggcgggtcgc 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggagatgtgccacatcgtcaagaagtatcctggcatgagttggggagtggcgggtcgc 271
Query: 561 tcagagggcaaactcaacaacttgctgaaagaagtatccaagaaagtcgacgaggacttg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tcagagggcaaactcaacaacttgctgaaagaagtatccaagaaagtcgacgaggacttg 331
Query: 621 tcgtcggtgaaggtgataacagcggagttgtcggacgaggcctctctcaaggcgatgacg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcgtcggtgaaggtgataacagcggagttgtcggacgaggcctctctcaaggcgatgacg 391
Query: 681 gcccaggcccgcgtgctggtcaactgttgcgggccttactacctgtacggggagcctgtc 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gcccaggcccgcgtgctggtcaactgttgcgggccttactacctgtacggggagcctgtc 451
Query: 741 gtcaaggcctccatagacaccaagacacactacgtggacgtcagcggggagccgcagttc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtcaaggcctccatagacaccaagacacactacgtggacgtcagcggggagccgcagttc 511
Query: 801 atggagagaatgcagctggtgtacgggtcggcggcgcgcgaggccggcgtcttcattatc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atggagagaatgcagctggtgtacgggtcggcggcgcgcgaggccggcgtcttcattatc 571
Query: 861 agcgcctgcggcttcgacagcatccccaacgacctcggggtcatcttcctgcagcaaaat 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agcgcctgcggcttcgacagcatccccaacgacctcggggtcatcttcctgcagcaaaat 631
Query: 921 ttcggaggtaccttgaacagcgtggagtcctacctgtcaggagaggtgcctcccgagcac 980
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 632 ttcggaggtaccttgaacagcgtggagtcctacctgtcaggagaggtgcctcccgaacac 691
Query: 981 agcgggggcggagtcgtcaactacgggacctgggagtcgcttgtacacgggatgtcgcac 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 agcgggggcggagtcgtcaactacgggacctgggagtcgcttgtacacgggatgtcgcac 751
Query: 1041 cacaacgagctgccggcgctcaggaagaaactgtaccctgagaaactacccacgtacaga 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 cacaacgagctgccggcgctcaggaagaaactgtaccctgagaaactacccacgtacaga 811
Query: 1101 cccaaactaaagcccagattcatgatccatcggcgcggcggctggtgcctgccgttcccg 1160
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 812 cccaaactaaagcccagattcgtgatccatcggcgcggcggctggtgcctgccgttcccg 871
Query: 1161 ggctccgactcgtcggtggtgttccgtacacagagacagctccatgccgagggttcgcgc 1220
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 872 ggctccgactcgtcggtggtgttccgtacacagagacagctccatgtcgagggttcgcgc 931
Query: 1221 ccggcccaggtccgcacgtacgtgaggctgccgtcgctggtgtcggcgctgatcaccatg 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ccggcccaggtccgcacgtacgtgaggctgccgtcgctggtgtcggcgctgatcaccatg 991
Query: 1281 tttg 1284
||||
Sbjct: 992 tttg 995
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,308
Number of extensions: 4722
Number of successful extensions: 4722
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4722
Number of HSP's successfully gapped: 1
Length of query: 2182
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2165
Effective length of database: 8,119,229
Effective search space: 17578130785
Effective search space used: 17578130785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)