BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09707 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_686_C1 2357 0.0
>BF14_686_C1
Length = 1209
Score = 2357 bits (1189), Expect = 0.0
Identities = 1204/1209 (99%)
Strand = Plus / Plus
Query: 333 aacctcaagatagatcaattagttataaaagaaaatatggaattaaacgagaggatttta 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacctcaagatagatcaattagttataaaagaaaatatggaattaaacgagaggatttta 60
Query: 393 aagtatttagaggaaaatgaaaaggctgatacgttgaagctcgccaatgaattcaatgaa 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtatttagaggaaaatgaaaaggctgatacgttgaagctcgccaatgaattcaatgaa 120
Query: 453 gatcatcaaaaaatagtgggcgctgtgaaaagtcttgaagctttggacatgatagtatct 512
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcatcaaaaaatagtgggtgctgtgaaaagtcttgaagctttggacatgatagtatct 180
Query: 513 gaaccggtgaaaagtacgaaatgggaacttacggaagaggggaagttagtagctgaaaac 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaccggtgaaaagtacgaaatgggaacttacggaagaggggaagttagtagctgaaaac 240
Query: 573 ggaagtcatgaagccgtcttgtaccggagtattcctgaaaatggaatgtctcaagctgaa 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaagtcatgaagccgtcttgtaccggagtattcctgaaaatggaatgtctcaagctgaa 300
Query: 633 gtcatgaagaccgtgccaaatgcaaaagttggattcagcaaagcaatgtcatctggatgg 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcatgaagaccgtgccaaatgcaaaagttggattcagcaaagcaatgtcatctggatgg 360
Query: 693 atagttttagataaatctggaggaacgcctcttgttaagaagaaggttgacttgataaaa 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atagttttagataaatctggaggaacgcctcttgttaagaagaaggttgacttgataaaa 420
Query: 753 gatactgtacaaaaccatctcaatgagattaagaatggcgttgacaatattccagataaa 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatactgtacaaaaccatctcaatgagattaagaatggcgttgacaatattccagataaa 480
Query: 813 gagagaagtgattacaagaaaagaaaattacttcaagagatcactttcaagagttttgtt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagagaagtgattacaagaaaagaaaattacttcaagagatcactttcaagagttttgtt 540
Query: 873 ctatcaaagggacttcagtttgcgacaactataaagaaactggagaccgatataacaagt 932
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgtcaaagggacttcattttgcgacaactataaagaaactggagaccgatataacaagt 600
Query: 933 gaaatgcttatgactggggcgtggaaggatttgcagttcaagccctacaactttgatgct 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaaatgcttatgactggggcgtggaaggatttgcagttcaagccctacaactttgatgct 660
Query: 993 ctcggtcagccgcccgactcgggtcacctccaccctctactgaaagtcagatccgaattc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcggtcagccgcccgactcgggtcacctccaccctctactgaaagtcagatccgaattc 720
Query: 1053 cgtgaaatattcctagaaatgggtttcacagaaatgccaacaaatcgttatgtggagagc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgtgaaatattcctagaaatgggtttcacagaaatgccaacaaatcgttatgtggagagc 780
Query: 1113 tccttctggaatttcgatgctctgttccaaccccagcaacacccggccagagacgcccac 1172
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 781 tccttctggaatttcgatgctctgttccaaccccagcaacacccggccagggacgcccac 840
Query: 1173 gacacattcttcatttcctcaccagctgtttcatcacagtttcccatggactatttggag 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gacacattcttcatttcctcaccagctgtttcatcacagtttcccatggactatttggag 900
Query: 1233 aaagtcaaaaaggttcacagtgaaggcggctatggctctcagggttaccgttatacttgg 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaagtcaaaaaggttcacagtgaaggcggctatggctctcagggttaccgttatacttgg 960
Query: 1293 aagctggaggaagctcagaagaacctcctccggactcacacgacggccgtcagcgctcgg 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aagctggaggaagctcagaagaacctcctccggactcacacgacggccgtcagcgctcgg 1020
Query: 1353 acgttgtacaaacgagcagacagacacactcccatcaagtgcttcagtatagataaggtg 1412
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1021 acgttgtacaaacgagcagacagacacactcctatcaagtgcttcagtatagataaggtg 1080
Query: 1413 ttccgcaacgagaccctggacgcgacccacctggcggagttccaccaggtggagggagtc 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttccgcaacgagaccctggacgcgacccacctggcggagttccaccaggtggagggagtc 1140
Query: 1473 atcgctgacaaggacctgggcctggcggacctcatcacagtcctggacgacttcttcaaa 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atcgctgacaaggacctgggcctggcggacctcatcacagtcctggacgacttcttcaaa 1200
Query: 1533 cgactcggc 1541
|||||||||
Sbjct: 1201 cgactcggc 1209
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,981
Number of extensions: 7420
Number of successful extensions: 7420
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7418
Number of HSP's successfully gapped: 1
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)