BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09719 (UTR included)
(1615 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1E03 462 e-130
BF01009B1C04 448 e-125
>BF01019A1E03
Length = 592
Score = 462 bits (233), Expect = e-130
Identities = 248/254 (97%)
Strand = Plus / Plus
Query: 562 atgatctgagagaactctgtaatatagtatgtgatttattactagaagaaccgaatgttc 621
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 atgatctgcgagaactctgtaatatagtatnccnnttattactagaagaaccgaatgttc 60
Query: 622 aaccagtccaaacaccagttactgtttgtggtgatattcatggtcagttctatgacttag 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccagtccaaacaccagttactgtttgtggtgatattcatggtcagttctatgacttag 120
Query: 682 aagagctattccatataggaggacaagttcctagcactcagtatatatttatgggagatt 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagagctattccatataggaggacaagttcctagcactcagtatatatttatgggagatt 180
Query: 742 atgtcgatcgagggtactacagtcttgaaacgttgacactcttaatggctcttaaagcca 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtcgatcgagggtactacagtcttgaaacgttgacactcttaatggctcttaaagcca 240
Query: 802 ggtaccctgacagg 815
||||||||||||||
Sbjct: 241 ggtaccctgacagg 254
>BF01009B1C04
Length = 670
Score = 448 bits (226), Expect = e-125
Identities = 242/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 956 gttaatagatgagacaattttgtgtgtccatggaggtctgtcacctgatatagcaatgct 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gttaatagatgagacaattttgtgtgtccatggaggtctgtcacctgatatagcaatgct 311
Query: 1016 ggatcaaatccgttgtattaatagaaaccaacagattcctcacaaaggtgccttttgtga 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggatcaaatccgttgtattaatagaaaccaacagattcctcacaaaggtgccttttgtga 371
Query: 1076 cttactctggtccgacccagcggatgtcaaaacatggtaacttatcattttctttaataa 1135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 372 cttactctggtccgacccagcggatgtcaaaacatggtaacttattattttctttaaaaa 431
Query: 1136 atttgcagttacatttaaatagtcagtacaaaaatataaacaaaa-ttttttacttggca 1194
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 aattgcagttacatttaaatagtcagtacaaaaatataaacaaaagttttttacttggca 491
Query: 1195 attttt 1200
||||||
Sbjct: 492 attttt 497
Score = 260 bits (131), Expect = 6e-69
Identities = 137/139 (98%)
Strand = Plus / Plus
Query: 823 tactaagagggaaccatgagacctgtcaaataaccaaagtttatggtttctatgatgagt 882
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tactaagagggaaccatgagacctgtcaaataaccaaagtttatggtttttatgatgagt 60
Query: 883 gtctgaataaatatggaaatgcaaatgcatggaaggattgttgcagggtgtttgacctac 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctgaataaatatggaaatgcaaatgcatggaaggattgttgcagggtgtttgacctac 120
Query: 943 ttactgtagccgcgttaat 961
|||||||||||||| ||||
Sbjct: 121 ttactgtagccgcggtaat 139
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 222,708
Number of extensions: 4679
Number of successful extensions: 4679
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4677
Number of HSP's successfully gapped: 3
Length of query: 1615
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1598
Effective length of database: 8,119,229
Effective search space: 12974527942
Effective search space used: 12974527942
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)