BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09761 (UTR included)
(1251 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1C11 1522 0.0
>BF01045B1C11
Length = 838
Score = 1522 bits (768), Expect = 0.0
Identities = 814/828 (98%), Gaps = 1/828 (0%)
Strand = Plus / Plus
Query: 233 tgtcggtgtttaatgttgatacttgttgaaagatttaataaagtaatattaactttataa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tgtcggtgtttaatgttgatacttgttgaaagatttaataaagtaatattaactttataa 70
Query: 293 tttattacattccaatataatataattaccgctatgtcgggtcagaacgttaacgtctgt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tttattacattccaatataatataattaccgctatgtcgggtcagaacgttaacgtctgt 130
Query: 353 gatattggtgaagatgttaaggaaaaactaaagaagttccgtttccaaaaacacacttcg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gatattggtgaagatgttaaggaaaaactaaagaagttccgtttccaaaaacacacttcg 190
Query: 413 aactgtgctctgatattaaaggtgaacagggacaaacaagcgctggaagtggatgatgaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aactgtgctctgatattaaaggtgaacagggacaaacaagcgctggaagtggatgatgaa 250
Query: 473 ttagacaatatagagctggaggacctgcaggagatactcccgtcacatcagcccaggttt 532
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 251 ttagacaatatagagctggaggacctgcaggagatactcccgtcacaccaacccaggttt 310
Query: 533 atagtttacagctataagctggaacacacggacggacggatatcattcccgatgtgtttc 592
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 attgtttatagctataagctggaacacacggacggacggatatcattcccgatgtgtttc 370
Query: 593 atattctacacgccgcgggacgctcacatggagctgcaggtgatgtacgctggaacacaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atattctacacgccgcgggacgctcacatggagctgcaggtgatgtacgctggaacacaa 430
Query: 653 cgtgccttagctgctgctgtaggggctccgaggctgttggaagtcagagagattgacgat 712
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 cgtgccttagctgctgctgtaggggctccgaggctcttggaagtcagagagattgacgat 490
Query: 713 ctcactaacgaatggctcaacgacaaacttaaaagatagaccgatatagcatgtgccata 772
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 491 ctcaccaacgaatggctcaacgacaaacttaaaagatagaccgatataccatgtgccata 550
Query: 773 gtaataacataatgaacccacacaccaagcgtcccaaacgtcacatttacgcttatatga 832
||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 551 gtaataacataatgaacccacacaccaagcgtcccaagcgtcacatttacgcttctgtga 610
Query: 833 tgtgacggggcaaactcgttgtaaggtttctgtattcgacatgtcctagtggcgtgtaac 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtgacggggcaaactcgttgtaaggtttctgtattcgacatgtcctagtggcgtgtaac 670
Query: 893 ttgtacacggatagtttggaagttttttatcattctgatcaatgaatatactcg-ttttt 951
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 671 ttgtacacggatagtttggaagttttttatcattctaatcaatgaatatactcgtttttt 730
Query: 952 ttaaatctattaacgataaatttatattttataacagtgaatcctattatgacacttgct 1011
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 731 tttaatctattaacgataaatttattttttataacagtgaatcctattatgacacttgct 790
Query: 1012 agccgccattttgtcttatactttttcctgcatcacattcctgtctta 1059
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agccgccattttgtcttatactttttcctgcatcacattcctgtctta 838
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,034
Number of extensions: 4868
Number of successful extensions: 4868
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4867
Number of HSP's successfully gapped: 1
Length of query: 1251
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1234
Effective length of database: 8,119,229
Effective search space: 10019128586
Effective search space used: 10019128586
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)